Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0026 |
Symbol | |
ID | 1187404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 24130 |
End bp | 24417 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637408288 |
Product | hypothetical protein |
Protein accession | NP_808614 |
Protein GI | 29171568 |
COG category | [S] Function unknown |
COG ID | [COG5606] Uncharacterized conserved small protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0000862843 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT CAAATCAAGC CTTCAGCAGC GTCTGGGACG CCCTGGAGGA CTCACCAGCC GAAGCAGAGA ACATGCGTAT TCGCAGCAGC CTAATGTCGG CTATCCGAGA CTTTATCGAG GTGCGTCAGC TCTCGCAGGC TGACGCTGCG CAGCTGTTCA ACGTAACGCA ACCCCGCATT TCAGAACTCC AGCGCGGAAA GATCGACCTG TTCAGCGTGG ATCGATTGAT CAACATGCTA GCCCAGGGCG GCATGCACGT TGAGGTCAGT GTCAAAACTG CAGCTTGA
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Protein sequence | MTESNQAFSS VWDALEDSPA EAENMRIRSS LMSAIRDFIE VRQLSQADAA QLFNVTQPRI SELQRGKIDL FSVDRLINML AQGGMHVEVS VKTAA
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