Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0021 |
Symbol | |
ID | 1187399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | - |
Start bp | 21094 |
End bp | 21777 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637408283 |
Product | hypothetical protein |
Protein accession | NP_808609 |
Protein GI | 29171563 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0145504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTT ATGCTGTGGC AAATACGAAA GGTGGCGTAG GTAAGACCAC TACTGCAGTC AGCTTGGGAA TCGGTTTGAC GCTCAAAGGG CGCAAGGTGT GGGTAATTGA TGGCGACCGT CAGAAGACTG CGCAGAAAGC CATCACACAC CGGTATACCA AAGGGATCGA GCCTGCCTTG GCATGCGACG CTTATATTGA TGGTCCAACG CTGCGCAGCC AGCTGATGCT GCGCAAGGGC GACTATGACG ATATCGTGAT CGACGTGGGT GGCTTCGATT CTTCTGCTAT GCGTGCGGCA TTGGTTTTAT GCGATGCAGT GATCATACCG TTCCGTCCTC GCTCGTTTGA CATGTGGGCC TTTGACGAGA TGTTGCCTCT GCTGGAAGAC GCGCGTAGCA CTCGCGACGA CTTCCCCGCC TATGCGGTCC TCTGCCAGGC AGACCCTGGC GTTCTGGCAC TCGACAATAT TGAAGCGGCT AAATGGGTTT CGGAGTACCC ACAACTTACT TACGTGGATA CCCCGCTCCG TACACGTAAG GCTGTTAGCA ATGCCACAGG CCAAGGCATG GGGGTATGGG AGTACAGCCC CAAAGATGGT AAAGCAATCG CCGAAATCGA TGCTTTAATT AAATATCTAA TACATATGCA TTGCGGATCA AAACCGAATG AGGATGCAGC GTAA
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Protein sequence | MTIYAVANTK GGVGKTTTAV SLGIGLTLKG RKVWVIDGDR QKTAQKAITH RYTKGIEPAL ACDAYIDGPT LRSQLMLRKG DYDDIVIDVG GFDSSAMRAA LVLCDAVIIP FRPRSFDMWA FDEMLPLLED ARSTRDDFPA YAVLCQADPG VLALDNIEAA KWVSEYPQLT YVDTPLRTRK AVSNATGQGM GVWEYSPKDG KAIAEIDALI KYLIHMHCGS KPNEDAA
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