| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_B0018 |
|---|
| Symbol | stbB |
|---|
| ID | 1187396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004632 |
|---|
| Strand | - |
|---|
| Start bp | 18458 |
|---|
| End bp | 18877 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637408280 |
|---|
| Product | plasmid stability protein StbB |
|---|
| Protein accession | NP_808606 |
|---|
| Protein GI | 29171560 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.0242004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGC TCGATACGAA CGTAATTTCA GAACCGCAGC GCCGAGAGCC CAATGCCCAC
GTCCTTGACT GGATCGACGC ACAAGCGCTG GAAACGCTTT ATCTGTCCAC CATCACGGTA
GCCGAGTTGC GTGCTGGTAT CGCGCTGATG CCTGTCGGAA AACGCCAGGA TAGCTTGCGT
GAAAACCTGG AAAAGCACCT GCTGCCGATG TTCGCCAATA GGGTGCTGTC GTTCGATATG
ACTTGTACGA AGGCTTATGC CGAGCTGCTG GCCAAGTCCC GCGCAGCCGG GTTGGCGGTC
GAAACGGCAG ATGCCTTCAT TGCAGCCATC GCCCTCGCCA ACGGCTTCAC CGTCGCCACC
CGTGACACTG GCCCTTTTGA GGCTGCCGGG TTGAACGTCA TTAACCCCTG GGAAGCGTAA
|
|---|
| Protein sequence | MILLDTNVIS EPQRREPNAH VLDWIDAQAL ETLYLSTITV AELRAGIALM PVGKRQDSLR
ENLEKHLLPM FANRVLSFDM TCTKAYAELL AKSRAAGLAV ETADAFIAAI ALANGFTVAT
RDTGPFEAAG LNVINPWEA
|
|---|
| |