| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5500 |
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| Symbol | |
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| ID | 1187192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6265312 |
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| End bp | 6266763 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396819 |
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| Product | sodium/alanine transporter |
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| Protein accession | NP_795224 |
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| Protein GI | 28872605 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGAAA TGATTAACGA CTTTCTCTCC GGTAAGGTAC TGATCGTACT TATCGTTGGC
CTGGGTAGTT ACTTCACGAT CCGCTCGCGT TTCGTCCAGT TTCGACACTT TTTCCACATG
TTCTCGGTTT TCCGCGACAG TCTGCGCAGC AGCGCCGGCC AGCTGAGTTC GTTTCAGGCC
CTGATGCTCA GCCTTGCTGG CCGCGTCGGT GCAGGCAACA TTGCAGGCGT CGGCATTGCC
GTGACGCTGG GTGGTCCGGG TGCCGTGTTC TGGATGTGGG TCACCGCACT GGTCGGCATG
TCCAGCAGCT TCATCGAGTG TTCGCTCGCG CAGCTCTACA AGCGCAAGGA CTCCGAAGGC
CAGTTCCGCG GCGGTCCGGC GTATTACATC CAGCACGGTC TGGGCAAACG CTGGCTGGGT
ATGGTCATGG CCGTACTGCT GCTGGTGACC TTCGGCTTTG CCTTCAACGG CCTGCAATCC
CACGCCGTGA CCGACTCGCT GAAAAGCGCG TTCAACGTCG ACACCAAAAC CACCGGCATC
TGCCTGGTTG TGTTGCTGGG TCTGGCGTTC GTCGGCGGCA TCAAGCGCAT CGCGGCAATT
TCCGACCTGC TGGTCCCGGT CAAGACCCTG ATCTACATCG CGGTCACCAT CTACGTCATC
GTTCTGCAGA TCGACCACGT GCCCGGCATG CTGATGACCA TCGTCAGAAG CGCCTTCGGC
CTTGACCCGG TATTCGGTGG CCTGATCGGC AGCGCGATCG TGATGGGCGT CAAGCGTGGT
GTGTTTGCCA ACGAAGCCGG TCTGGGCAGT GCGCCCAACG TGGCGGCTGT AGCGCATGTA
GAACACCCGG TGGCACAGGG CGTGGTTCAG GCGTTCAGCG TGTTCCTCGA CACCTTCGTC
ATCTGCACCT GCACCGCCTT GCTGATCCTG CTGTCGGGTA TCTACGACAT CGGTTACGAC
GGCAACGGTA TCGTGCTGGC GCAAAACTCG CTGGCCGCCG TGGTCGGCGA CTGGGGCCGG
ATCTTCATCA GCGTGGCGCT GGCGTTGTTC GTCTTCACCT CGATTCTCTA CAACTACTAC
CTGGGCGAAA ACAGCCTGCG TTTCCTGTTC GGCGAGAAGA TCCAGACCAT CATCATTTAC
CGTATCGCGG TGCTGGTGCT GATCATGTGG GGCGCTGTCG TCGACCTGAA AGATGTACTG
GCCTTCGCCG ACATCACCAT GACCATGCTG GCGTTCGTCA ACCTGATCGC ACTGGCGATG
CTGTTCAAAG TCGTCAAGCG TATCCTCAAC GACTACGATG CGCAGCGTCG GGCAGGCATC
AAGACGCCAG TGTTCGACTC CAGCCAGTTC CCTGATCTGG ACCTGGACCG TAGCGCCTGG
CCGGCCAACC CGAGCCGTCA GTCGACACAC GATGCCGAAC TGGCGGGCAA GCCTGCGCCT
GAAGCCCGAT AA
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| Protein sequence | MLEMINDFLS GKVLIVLIVG LGSYFTIRSR FVQFRHFFHM FSVFRDSLRS SAGQLSSFQA
LMLSLAGRVG AGNIAGVGIA VTLGGPGAVF WMWVTALVGM SSSFIECSLA QLYKRKDSEG
QFRGGPAYYI QHGLGKRWLG MVMAVLLLVT FGFAFNGLQS HAVTDSLKSA FNVDTKTTGI
CLVVLLGLAF VGGIKRIAAI SDLLVPVKTL IYIAVTIYVI VLQIDHVPGM LMTIVRSAFG
LDPVFGGLIG SAIVMGVKRG VFANEAGLGS APNVAAVAHV EHPVAQGVVQ AFSVFLDTFV
ICTCTALLIL LSGIYDIGYD GNGIVLAQNS LAAVVGDWGR IFISVALALF VFTSILYNYY
LGENSLRFLF GEKIQTIIIY RIAVLVLIMW GAVVDLKDVL AFADITMTML AFVNLIALAM
LFKVVKRILN DYDAQRRAGI KTPVFDSSQF PDLDLDRSAW PANPSRQSTH DAELAGKPAP
EAR
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