Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5494 |
Symbol | purE |
ID | 1187186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 6260019 |
End bp | 6260525 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396813 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | NP_795218 |
Protein GI | 28872599 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGCA CGACGATGAG CGCACTGGTT GGCGTGATCA TGGGCTCCAA GTCCGATTGG TCCACCCTTA GCCACACCGC CGACATGCTG GAAAAGCTCG GCATTCCTTT TGAAGTCAAA GTGGTGTCAG CTCACCGCAC GCCGGACCTG CTGTTCCAGT ACGCCGACGA AGCCGAAGGC CGTGGCATTG AAGTGATCAT CGCCGGTGCC GGTGGTGCCG CTCACTTGCC GGGTATGTGC GCTGCCAAGA CTCACCTGCC TGTATTGGGC GTTCCGGTGC AGTCCTCCAT GCTCTCGGGT GTCGACTCCC TGCTGTCGAT CGTGCAGATG CCCGCTGGCA TTCCGGTCGC GACGCTGGCC ATCGGCAAGG CCGGTGCGAT CAACGCAGCG CTGCTGTCGG CAAGCATTCT CGGCGCCAAG CACCCGCAAT TTCACGCAGC GCTGAAGAAA TTTCGCACTG AGCAGACAGA CAGCGTCCTG GACAATCCAG ACCCACGCCA CGCCTGA
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Protein sequence | MRGTTMSALV GVIMGSKSDW STLSHTADML EKLGIPFEVK VVSAHRTPDL LFQYADEAEG RGIEVIIAGA GGAAHLPGMC AAKTHLPVLG VPVQSSMLSG VDSLLSIVQM PAGIPVATLA IGKAGAINAA LLSASILGAK HPQFHAALKK FRTEQTDSVL DNPDPRHA
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