Gene PSPTO_5494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5494 
SymbolpurE 
ID1187186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6260019 
End bp6260525 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content61% 
IMG OID637396813 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionNP_795218 
Protein GI28872599 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGCA CGACGATGAG CGCACTGGTT GGCGTGATCA TGGGCTCCAA GTCCGATTGG 
TCCACCCTTA GCCACACCGC CGACATGCTG GAAAAGCTCG GCATTCCTTT TGAAGTCAAA
GTGGTGTCAG CTCACCGCAC GCCGGACCTG CTGTTCCAGT ACGCCGACGA AGCCGAAGGC
CGTGGCATTG AAGTGATCAT CGCCGGTGCC GGTGGTGCCG CTCACTTGCC GGGTATGTGC
GCTGCCAAGA CTCACCTGCC TGTATTGGGC GTTCCGGTGC AGTCCTCCAT GCTCTCGGGT
GTCGACTCCC TGCTGTCGAT CGTGCAGATG CCCGCTGGCA TTCCGGTCGC GACGCTGGCC
ATCGGCAAGG CCGGTGCGAT CAACGCAGCG CTGCTGTCGG CAAGCATTCT CGGCGCCAAG
CACCCGCAAT TTCACGCAGC GCTGAAGAAA TTTCGCACTG AGCAGACAGA CAGCGTCCTG
GACAATCCAG ACCCACGCCA CGCCTGA
 
Protein sequence
MRGTTMSALV GVIMGSKSDW STLSHTADML EKLGIPFEVK VVSAHRTPDL LFQYADEAEG 
RGIEVIIAGA GGAAHLPGMC AAKTHLPVLG VPVQSSMLSG VDSLLSIVQM PAGIPVATLA
IGKAGAINAA LLSASILGAK HPQFHAALKK FRTEQTDSVL DNPDPRHA