| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5480 |
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| Symbol | |
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| ID | 1187172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6240594 |
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| End bp | 6241400 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396799 |
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| Product | peptidase, M23/M37 family |
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| Protein accession | NP_795204 |
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| Protein GI | 28872585 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTTCT CTGACCGGCC GACGCCGGGT GCATCGGTCA TGGTCTTTCG GGACCGGATG
GTCGAACGTA TCGACCAGCA GGTGCACCTG AGTGTGCGGC GGGAAAAGGG CGTGCACAGC
CTGTATGTGC GTAACGACCT TTATGCCCCG GTCGAGGTTG AACTCAAGCT TTCCAGCGTC
ACCAACGTGT TGGGTGTGGC AGGAGCTTCC TCGACATTGC GCCGCACTAT CCCGGCACGC
AGTAACGAAC GGGTGGTGGT CTTGAGCCCC AAGGTTGCGA GCAAGCCGAT GAATTACGCG
TCGATGCTCA CCTCCACGCT GGGCGATCCC AAGGGCTCGG TACACGCTTA CAAATACCCG
TTGCCGTGGA TCGGTGGGCC GTTTCGTCTG ACCCAGGGGC CTAATGGCAG ATACAGCCAC
TTCGGTGTCA AAGGGCGCTA CGCGATGGAC ATCGCCATGC CCGAAGGCAC GCCGATCATC
GCAGCGCGCG GCGGCACGGT GGTGAAGATC GAAAACAGCC AGTCAGGCAG AGGCTCGAAT
GCGTCAGGCA ACTTTGTGCG GATTCTGCAC GAGGACGGCA CGATGGGCGT CTACCTGCAC
TTGATGCAAG GCTCGGTGGC GGTCAGGGAA GGTCAGCGGG TCAGTGTCGG TACGGCGCTG
GCGCGTTCCG GCAATACCGG CAACAGCACC GGCCCGCACC TGCACTTTGT CGTGCAACGC
AATTCGGGCA ATGAACTGGT CTCCATCCCC TACGAATTCG CTACACCGGT ACCGAGCCTG
CCCAACTTCG CGGTGGGCGG GAATTAG
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| Protein sequence | MSFSDRPTPG ASVMVFRDRM VERIDQQVHL SVRREKGVHS LYVRNDLYAP VEVELKLSSV
TNVLGVAGAS STLRRTIPAR SNERVVVLSP KVASKPMNYA SMLTSTLGDP KGSVHAYKYP
LPWIGGPFRL TQGPNGRYSH FGVKGRYAMD IAMPEGTPII AARGGTVVKI ENSQSGRGSN
ASGNFVRILH EDGTMGVYLH LMQGSVAVRE GQRVSVGTAL ARSGNTGNST GPHLHFVVQR
NSGNELVSIP YEFATPVPSL PNFAVGGN
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