| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5476 |
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| Symbol | ubiA |
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| ID | 1187168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6235935 |
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| End bp | 6236825 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396795 |
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| Product | 4-hydroxybenzoate polyprenyl transferase |
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| Protein accession | NP_795200 |
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| Protein GI | 28872581 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCTGT CCCTGCTCAA ATCCCTCAAT CGCCTGAGCC CACGCGCCTG GGATTTTGTC
CAACTGACAC GTATCGACAA GCCGATCGGC ATTTATCTGT TGCTGTGGCC AACCCTGTGG
GCGGTCTGGA TCGCAGGCAA GGGCTCGCCG TCGCTGAACA CGGTGTTCAT CTTCGTGGCA
GGCGTATTCC TCATGCGCGC GGCGGGCTGC GTGATCAATG ACTTCGCCGA CCGCAAGGTC
GATGGTCACG TAAAGCGTAC CGAACAACGC CCGCTGGTCA GCGGTAAAGT CAGTTCGCGT
GAAGCGTTGG TTCTGTTTGC CGTACTGGTC AGCCTGAGTT TTGTGCTGGT GCTGTTCACC
AACAGCACGA CGATCTGGCT GTCATTTGGC GGGCTGGCGC TGGCTGCCTG TTATCCGTTC
ATGAAGCGCT ACACCTATTA CCCGCAGGTG GTGCTGGGTG CCGCGTTCTC GTGGGGAATG
CCGATGGCGT TTACCGCTGA AACCGGCGAG CTGCCTGCCG CAGCCTGGCT GTTGTACATC
GCCAACCTGC TCTGGACAGT GGGCTACGAC ACTTACTACG CAATGGTCGA TCGCGACGAT
GACCTGAAAA TCGGCGTGAA ATCCACCGCC GTGCTGTTTG GCGATGCCGA CCGCGTGATC
ATTTTGTCCC TGCAAGGTCT GGCGCTGGGC TGTCTGGCGC TGGCCGGTTC GCGCTTTGAG
CTGGGTGCCT TTTTCTACAT GGGGTTGCTG GTCGCGGCTG CCTGCTTCGC CTGGGAATTC
TGGAGCACGC GCCTGCGCGA GCGCGATGCC TGCTTCAAGG CCTTTCTGCA CAATCATTGG
GCGGGCCTTG CGATATTCCT CGGCATCGTC GCCGATTACG CCTTGCGCTG A
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| Protein sequence | MYLSLLKSLN RLSPRAWDFV QLTRIDKPIG IYLLLWPTLW AVWIAGKGSP SLNTVFIFVA
GVFLMRAAGC VINDFADRKV DGHVKRTEQR PLVSGKVSSR EALVLFAVLV SLSFVLVLFT
NSTTIWLSFG GLALAACYPF MKRYTYYPQV VLGAAFSWGM PMAFTAETGE LPAAAWLLYI
ANLLWTVGYD TYYAMVDRDD DLKIGVKSTA VLFGDADRVI ILSLQGLALG CLALAGSRFE
LGAFFYMGLL VAAACFAWEF WSTRLRERDA CFKAFLHNHW AGLAIFLGIV ADYALR
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