Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5465 |
Symbol | |
ID | 1187157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6226740 |
End bp | 6228233 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396784 |
Product | acetyl-CoA hydrolase/transferase family protein |
Protein accession | NP_795189 |
Protein GI | 28872570 |
COG category | [C] Energy production and conversion |
COG ID | [COG0427] Acetyl-CoA hydrolase |
TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCGTG ACCGTATCCG CCTGCCCTCC CTGATGAGCA AGGTTATGAG CGCAGCCGAT GCTGCTGCAT TGATTGAAGA CGGCATGACC GTCGGCATGA GCGGCTTCAC CCGCGCAGGC GAAGCCAAGG CCGTGCCTCA TGCGCTGGCC GAGCGCGCCA AGGTGACACC CCTGAAAATC AGCCTGATGA CGGGTGCCAG CCTGGGCAAT GACCTGGACA AGCAACTGAC CGAATCCGGC GTGCTGTCCC GGCGCATGCC GTTTCAGGTC GACAGCACTC TGCGCAAGGC GATCAACAAC GGCACGGTGA TGTTCATCGA CCAGCATTTG TCCGATACCG TCGAGTTGTT GCGCAATCGG CAGATCAAGG CCGTGGACCT GGCGGTGATC GAGTGTGTGG CAATTACCGA GGAAGGCCAC CTGGTGCTGA GCACCTCCGT TGGCAACTCG GCCAGTTTCG CTATTCTGGC CAAACAGGTC ATCGTGGAAA TCAACCTGTC CCAGCCTCTG GAGCTGGAAG GCCTGCATGA CATCTATATA CCCAGCTACC GGCCGACGCG CCTGCCGATC CCGGTGCTGG AAGCCGATTC GCGCATCGGC AGCCATGCGG TGAAGATCGA CCCGGCGAAG ATCGTCGGCA TCGTTATCAG CAACCAGCCT GACTCGCCTT CCACCGTCAC GCCACCTGAC GCAGACACTC AGGCCATCGC CAACCACCTG GTGGAGTTCT TCAAGAAGGA GGTGCGCGAA GACCGGCTCA CCGACAAACT GATGCCCCTG CAGGCGGGCA TTGGCAACAT CGCCAACGCA GTCATGCATG GCCTGCTGGA ATCGCCATTC ACTGACCTGA CCATGTATTC CGAAGTATTG CAGGACTCGA CATTCGACCT GTTCGACGCC GGCAAACTGA CATTTGCTTC CGGCAGCTCC ATGACCCTGT CAGCGGCCAA ACACGCCGAA GTATTTGCCG ACTTCAACCG CTATAAATCC AGGCTGGTGC TGCGCCCGCA GGAAATATCC AATCACCCCG AAGTCATCCG GCGCCTGGGG ATTATCGGGA TCAATACCGC GCTGGAGTTC GATCTGTACG GCAACGTCAA CTCCACCCAC ATCTGTGGCA CGCGGATGAT GAACGGCATT GGCGGCTCTG GGGATTTTTC GCGCAACGCG CACCTGGCGA TATTCGTCAC CAAGTCGATT GCCAAGGGCG GTGCCATTTC CAGCGTTGTG CCGATGGTCA GCCATGTCGA CCACACCGAG CATGACGTCG ACATTCTGGT GACCGAGCAG GGGCTGGCCG ATTTACGCGG GCTGGCACCT CGCGAGCGGG CGCGGGTGAT CATCGATAAC TGCGTACATG CTGATTATCG CGATGCGTTG AACGCCTATT TCGACGCCGC CTGCGCGCTG GGCGGGCATA CGCCGCACAT CCTTCGGGAA GCACTGAGTT GGCACATCAA CCTGGAAGAA AACGGGCGCA TGCTGCCGAC CTGA
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Protein sequence | MYRDRIRLPS LMSKVMSAAD AAALIEDGMT VGMSGFTRAG EAKAVPHALA ERAKVTPLKI SLMTGASLGN DLDKQLTESG VLSRRMPFQV DSTLRKAINN GTVMFIDQHL SDTVELLRNR QIKAVDLAVI ECVAITEEGH LVLSTSVGNS ASFAILAKQV IVEINLSQPL ELEGLHDIYI PSYRPTRLPI PVLEADSRIG SHAVKIDPAK IVGIVISNQP DSPSTVTPPD ADTQAIANHL VEFFKKEVRE DRLTDKLMPL QAGIGNIANA VMHGLLESPF TDLTMYSEVL QDSTFDLFDA GKLTFASGSS MTLSAAKHAE VFADFNRYKS RLVLRPQEIS NHPEVIRRLG IIGINTALEF DLYGNVNSTH ICGTRMMNGI GGSGDFSRNA HLAIFVTKSI AKGGAISSVV PMVSHVDHTE HDVDILVTEQ GLADLRGLAP RERARVIIDN CVHADYRDAL NAYFDAACAL GGHTPHILRE ALSWHINLEE NGRMLPT
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