| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5406 |
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| Symbol | fdhD |
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| ID | 1187093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6137836 |
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| End bp | 6138672 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396723 |
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| Product | formate dehydrogenase accessory protein FdhD |
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| Protein accession | NP_795133 |
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| Protein GI | 28872514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTCA CGCGCAAGGT CAGCTCGGTG CCCGTTTCCG CGCCAGCCCC CGAAGCAAGC
CAGAATTACA GCTACTCGAA TCTCGAGGGG CAGGATTGCG CACGCAACGC GCTTGCTGAA
GAAGTGGCAC TGGCCATTGC CTACAACGGC ATCAGCCAGG CGGTCATGCT GGTCAGCCCC
ACCGATCTTG AAGACTTTAT CGTCGGTTTC AGCCTGGGCA GCGGCATCAT TGCCTCACGC
GATGAAATCT ACGACTTCAC GCTCAGCGGC TGTGGTTCGG CGATGCAGGC CGAGGTCGAA
ATCGCCAGCC GGGCCTTCTG GGACCTCAAA CAGCAACGGC GACAACTGGC CGGCACCAGC
GGCTGCGGAT TGTGCGGTGT CGAAGCGGTC GAGCAGGCGC TGCCGGAGCT GAATGTATTA
CCCGGAGCGC CTTTGCCGCC GATTGAATGG CTGGAAGGCC TGCGCCAGCG CATCGGCGAA
TTCCAGCCGC TTGGCCGCCA CTGTGGCGCG GTGCATGCCG CGGTCTTCAT GGACAACACC
GGTCAGTTGC TGCTGGGCCG CGAAGACATC GGCCGCCATA ACGCGCTGGA CAAGCTGATC
GGCGCGCTTA TCCGCCAGGA CATTCCCATG ACCGGCGGCG TGGCGATTGT GACCAGTCGC
TGCAGCCTGG AACTGATTCA GAAAGTATTG CGCGCCGGCA TTCAGACCCT GGTCAGTCTG
TCCTCGCCCA CCGGACTTGC CCTGCAATGG GCTCGCCGTC ACAACCTCAA TTTAATCCAC
CTGCCGCAGC ACAGTGCGCC GCGGGTCTAT AGCCCTGCGA TGGAGATTCA AGCGTGA
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| Protein sequence | MHVTRKVSSV PVSAPAPEAS QNYSYSNLEG QDCARNALAE EVALAIAYNG ISQAVMLVSP
TDLEDFIVGF SLGSGIIASR DEIYDFTLSG CGSAMQAEVE IASRAFWDLK QQRRQLAGTS
GCGLCGVEAV EQALPELNVL PGAPLPPIEW LEGLRQRIGE FQPLGRHCGA VHAAVFMDNT
GQLLLGREDI GRHNALDKLI GALIRQDIPM TGGVAIVTSR CSLELIQKVL RAGIQTLVSL
SSPTGLALQW ARRHNLNLIH LPQHSAPRVY SPAMEIQA
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