| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5404 |
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| Symbol | |
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| ID | 1187091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6136260 |
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| End bp | 6136700 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637396721 |
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| Product | LysM domain protein |
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| Protein accession | NP_795131 |
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| Protein GI | 28872512 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCCTTA TCAGTTTTAT CAAAGAAGCC GGCGAGAAAA TTCTGGACGC GCTGACGCCA
GACCATGCTA ACGCAGACGA CGTATTGAAA AAGCATATCT CCGAAGTGGG CCTGGGCAAT
CCCAATGTTC AGACTGAGGT CAGCGGTGGC ACTGTCACCG TGAAAGGCCA GGTCGCCAAT
CAGGAGGAAA GGGAAAAGAT TGTCGTCACG CTGGGCAATA TTCATGGCGT GGATAAAGTC
GACGACCAAA TGACTGTTGC GGGCGGCGAG ACTGCTGAAT CCGAATACGT CGAAGTGAAA
TCGGGCGACA CCCTCAGCGA TATTTCCAAG CGCGTATACG GCGATGCCAA TCAGTACCAG
AAAATCTTTG AAGCCAACAA GCCGATGCTC AAGGACGTAA ACAAGATTTA TCCGGGCCAG
AAGCTTCGTA TTCCCAAGTG A
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| Protein sequence | MGLISFIKEA GEKILDALTP DHANADDVLK KHISEVGLGN PNVQTEVSGG TVTVKGQVAN
QEEREKIVVT LGNIHGVDKV DDQMTVAGGE TAESEYVEVK SGDTLSDISK RVYGDANQYQ
KIFEANKPML KDVNKIYPGQ KLRIPK
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