| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5344 |
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| Symbol | |
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| ID | 1187030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6074827 |
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| End bp | 6076035 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396664 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | NP_795075 |
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| Protein GI | 28872456 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.803856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGTTGT CAGATACCAC CATCCGTACC GCAAAGCCCA AGGACAAGCT TTATCGCCTG
ACCGATGCCA ACGGCCTTTG CCTTGAAATC GCTCCATCGG GATCGAAGCT CTGGCGATAT
CGATATCGCT TTAACGGCAA AGCAAAGATG CTGGCGCTTG GTGCCTACCC AGCTGTCACT
CTTCTGAAAG CTCGCCAGCT CCGCGATAGT GCACGTCAGT TGCTGGTTGA GGGCAATGAT
CCCGGCGAGC ACAAAAAAAC CGCTCAGCAA GCACAGAAGG TTGAAGGGCT GACTTTTGAA
ACACTTGCCC GTGAGTGGTT CGCGTACAAC TCCCCCCGCT GGGCAGAGAG CACCACCTAT
AAGGCCAAGC TTTATATGGA GAACGACCTT ATTCCCGGTA TCGGTGCCCG TCCGGTGAAA
GCGCTCACCC GGCCCGATCT GGTTGATCTG GTGCGCAAGG TGGAGGCCCG CGGCACATTG
AATGCGGCTG GCAAGATCCG TCAGTGGCTG CACCAGATAT TCCGTTACGG CCTGGCAAAG
GGAGTTGTCG AGAGCAACCC GGCCACCGAC CTGGACGTTG TAGCCGCGCC GCAGAAAGCG
CCCCGTCATC ATCCACATGT GCCGTTCTCA GAATTACCCG AGCTTCTTGA GATATGCGAC
GGGTCTAAGA TCAACACATT GACCCGATGC GCCATTCACT TACTGGTGCT GACCGCCGTT
CGACCAGGCG AGCTGCGAAA TGCCCCTTGG TCAGAGTTCG ATCTGGATGC TGCTACTTGG
GCTATCCCAA AGGAGCGAAT GAAAGCTCGC AGACCTCATG TCGTCCCCCT ACCCACTCAA
GCGGTCGACA TCCTGCGCCA GCTCCAGCCA ATCACAGGTC GATACCCGTT GGTATTCGCT
GGCCAGCACA ACCCCAGCCG ACCAATGAGC GAGAACACGA TCAATAAAGC ACTGCGCTTG
TTGGGCTACG AGAATCGTCA AACCGGCCAC GGCTTCCGCC ATTTGCTTTC CACCGAGCTC
AATGGGCGCG GGTATAACAA AGACTGGATA GAGCGCCAGC TTGCGCACGG TGACGCTGAC
GGCATCCGCG ACACCTACAA CCATGCCAGC TATCTGGAGC AGCGCCGGGG AATGATGCAG
GCCTGGGCCG ACTCAATCGA CGCGCTAAGT GCTGGCTCCA ACGTGGTGAG CATCAAGCGC
CAGGCTTAA
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| Protein sequence | MPLSDTTIRT AKPKDKLYRL TDANGLCLEI APSGSKLWRY RYRFNGKAKM LALGAYPAVT
LLKARQLRDS ARQLLVEGND PGEHKKTAQQ AQKVEGLTFE TLAREWFAYN SPRWAESTTY
KAKLYMENDL IPGIGARPVK ALTRPDLVDL VRKVEARGTL NAAGKIRQWL HQIFRYGLAK
GVVESNPATD LDVVAAPQKA PRHHPHVPFS ELPELLEICD GSKINTLTRC AIHLLVLTAV
RPGELRNAPW SEFDLDAATW AIPKERMKAR RPHVVPLPTQ AVDILRQLQP ITGRYPLVFA
GQHNPSRPMS ENTINKALRL LGYENRQTGH GFRHLLSTEL NGRGYNKDWI ERQLAHGDAD
GIRDTYNHAS YLEQRRGMMQ AWADSIDALS AGSNVVSIKR QA
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