Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5303 |
Symbol | potG |
ID | 1186988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 6029633 |
End bp | 6030775 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396622 |
Product | putrescine ABC transporter, ATP-binding protein |
Protein accession | NP_795034 |
Protein GI | 28872415 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTG CCTCCGGCGC CTACAAGAAA GCCCTCGAAG GCGGTCAGCA ACCCAAAGAG GTGCTGGTCA GGATCGATAG GGTCACCAAG AAGTTCGACG AGACGATTGC GGTGGACGAT GTGTCCCTGC AGATCAACAA GGGCGAAATC TTCGCCCTGC TTGGCGGCTC TGGCTCCGGC AAGTCCACGC TGCTGCGCAT GCTGGCCGGT TTCGAGCGCC CGACCGAGGG GCGTATCTAC CTCGACGGCG TCGACATCAC CGACATGCCG CCGTACGAAC GTCCGATCAA CATGATGTTT CAGTCCTATG CGCTGTTCCC GCACATGACC GTGGCCGACA ACATCGCCTT CGGCCTCAAG CAGGACAAGC TCGCCAAGTC GGAAATCGAA GCCCGTGTGG CCGAAATGCT CAAGCTGGTG CAGATGACCC AGTACGCCAA GCGCAAGCCG CATCAGCTTT CCGGCGGCCA GCGTCAGCGT GTTGCGCTGG CCCGTTCGCT GGCCAAAAAG CCCAAGCTGC TGCTGCTCGA TGAACCGATG GGCGCGCTGG ACAAGAAACT GCGCTCGCAG ATGCAACTGG AGCTGGTGGA GATCATCGAG CGCGTTGGCG TGACCTGCGT GATGGTGACT CACGATCAGG AAGAGGCCAT GACCATGGCC GAGCGCATCG CCATCATGCA TCTGGGCTGG ATCGCGCAGA TCGGCAGCCC TATCGACATC TACGAAACCC CTACCAGCCG TCTGGTCTGC GAGTTCATCG GCAGCGTCAA CCTGTTCGAG GGTGAAGTGA TCGAGGACAT GGAAGGCCAT GCGCTGATCC GCAGCCCGGA GCTGGAACGC AACATTTATG TCGGCCACGG CGTCAGTACG TCGGTGGAAG ACAAGCACAT CACCTACGCA TTGCGCCCGG AAAAACTGCT GATCACCGCT GAACAACCCG GTTTCGAATA CAACTGGTCG CGCGGCAAGG TCCACGACAT TGCCTACCTG GGCGGCCATT CGGTGTTCTA CGTCGAACTG CCGGGCGGCA AGCTGGTGCA GTCGTTTGTC GCCAATGCCG AGCGTCAGGG CGCGCGACCT ACCTGGGGCG ATGAAGTCTA CGTCTGGTGG GAAGACGACA GCGGCGTGGT ACTGCGCTCA TGA
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Protein sequence | MAVASGAYKK ALEGGQQPKE VLVRIDRVTK KFDETIAVDD VSLQINKGEI FALLGGSGSG KSTLLRMLAG FERPTEGRIY LDGVDITDMP PYERPINMMF QSYALFPHMT VADNIAFGLK QDKLAKSEIE ARVAEMLKLV QMTQYAKRKP HQLSGGQRQR VALARSLAKK PKLLLLDEPM GALDKKLRSQ MQLELVEIIE RVGVTCVMVT HDQEEAMTMA ERIAIMHLGW IAQIGSPIDI YETPTSRLVC EFIGSVNLFE GEVIEDMEGH ALIRSPELER NIYVGHGVST SVEDKHITYA LRPEKLLITA EQPGFEYNWS RGKVHDIAYL GGHSVFYVEL PGGKLVQSFV ANAERQGARP TWGDEVYVWW EDDSGVVLRS
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