Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5267 |
Symbol | |
ID | 1186952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5987914 |
End bp | 5988396 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637396586 |
Product | zinc uptake regulation protein, putative |
Protein accession | NP_794998 |
Protein GI | 28872379 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAATA CTCCCCTGGC CAGTCGCCCC CATGATCATT CGCACTGCGT GCATTCGGCC CTCGCCGAAG CTGAAACGCT GTGCACACAA CAGGGTCTGC GCCTGACCAC ATTGCGCCGC CGCGTGCTGG AACTGGTCTG GCAAAGCCAC AAGCCGCTGG GTGCCTACGA CATCCTTGCA GTGCTCAGTG AAGAAGACGG TCGTCGTGCT GCGCCGCCCA CCGTTTACCG GGCTCTGGAT TTTCTCCTGG AAAACGGCCT GGTGCACCGC ATCGCGTCGC TCAACGCATT TACCGGCTGC AACCACCCGA CCCACGCGCA TCAGGGCCAG TTCCTGATCT GCCGCCTGTG TCACGCCGCC ATCGAATTGC AGCACCCAGC GATCAGTAAT GCCGTCGTCG ATGCGGCTGC CGGCGTTGGT TTTGCGGTCG AAGGCCAGAC GGTCGAAATC GTCGGCGTGT GCGCTGGTTG CAAGGCAGCC TGA
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Protein sequence | MPNTPLASRP HDHSHCVHSA LAEAETLCTQ QGLRLTTLRR RVLELVWQSH KPLGAYDILA VLSEEDGRRA APPTVYRALD FLLENGLVHR IASLNAFTGC NHPTHAHQGQ FLICRLCHAA IELQHPAISN AVVDAAAGVG FAVEGQTVEI VGVCAGCKAA
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