Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5261 |
Symbol | metI-2 |
ID | 1186946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5981244 |
End bp | 5981918 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637396580 |
Product | D-methionine ABC transporter, permease protein |
Protein accession | NP_794992 |
Protein GI | 28872373 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTT TCCTGAACCT GTTTGCCAAC GTCGACTGGT ACGAGATCTG GGTCGCCACG GGCGATACCC TGATCATGCT CAGTGTTTCG CTGGGTTTCA CTATTCTGCT CGGGCTGCCC CTGGGCGTGC TGATGTTCCT GACATCGCCG CGTCAGTTGC TGGAGCATAA ACAGCTGTAC GCCACGGTCG GTTTGATCGT GAACATGCTG CGCGCGCTGC CGTTCATCAT TCTGCTGATC GTGATGATGC CGCTGACCGA AATCATCACT GGCACATCAT TGGGCATTCT CGGCACGCTG CCGCCGCTGA TTGCCGGCGC CACGCCGTTT TTTGCGCGCC TGGTGGAAAC CGCATTGCGT GAAGTGGATC GCGGCATCAT CGAAGCCACA CAGGCAATGG GCGCCACCAC CCGGCAAATA ATCGTCAAGG CACTGCTGCC CGAAGCTCGC CCCGGCATTG TGGCGGCGAT TACCGTCACT GCCATCGCGC TGGTGTCCTT CACCGCCATG GCGGGTGCGG TAGGTGCTGG CGGGCTGGGC GATCTGGCCA TTCGTTACGG TTATCAACGC TTCCAGAACG ATGTGATGTT CGTGACGGTC GTATTGTTGC TGGTACTGGT GCAGATTCTG CAGACCATCG GCGACAGACT GGTCGCACAC TTCACCCACC GTTGA
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Protein sequence | MDAFLNLFAN VDWYEIWVAT GDTLIMLSVS LGFTILLGLP LGVLMFLTSP RQLLEHKQLY ATVGLIVNML RALPFIILLI VMMPLTEIIT GTSLGILGTL PPLIAGATPF FARLVETALR EVDRGIIEAT QAMGATTRQI IVKALLPEAR PGIVAAITVT AIALVSFTAM AGAVGAGGLG DLAIRYGYQR FQNDVMFVTV VLLLVLVQIL QTIGDRLVAH FTHR
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