Gene PSPTO_5227 details

Gene Information

• Locus tag: PSPTO_5227
• ID: 1186912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5949328
• End bp: 5949939
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637396546
• Product: 5-formyltetrahydrofolate cyclo-ligase family protein
• Protein accession: NP_794958
• Protein GI: 28872339
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0212] 5-formyltetrahydrofolate cyclo-ligase
• TIGRFAM ID: [TIGR02727] 5,10-methenyltetrahydrofolate synthetase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGCG CCCAGTCACT TACACGTCCG CAATTGCGCC GCCAGCTACG CAAGGCACGC 
AGAGTGCTCA CTCGCAGCCA GCAACGCGCA GCCGCCCGCG GCCTCTACCA GCAGTTGGCG 
CAACACCCGC TGTTTCGACG CGCCCGTCAC GTCTCCCTGT ACCTGCCGAT GGACGGCGAG 
ATCGACCCGC GCCTGTTGCT GCGCGAAGCA CAGCGTCGCG GCAAGGCAAC TTACCTGCCG 
GTGCTCAACG CATGGCCACG CACCCGCATG GTTTTCCAGC GTGTGCGTCC CGGCGAGAAA 
TTCATCCCCA ATCGCTTTCG CATTCCCGAA CCGCGCATCA ATCGCACGAA GCAACGCCCT 
GTGTGGGCAC TCGACCTGGT GCTGATGCCG CTGGTGGGTT TCGATGACGA AGGCGGTCGC 
CTGGGCATGG GTGGCGGCTT CTACGACCGC AGCCTGGCGT ATCTGGCGCG CAGAAAAACC 
TGGCGCAAAC CGGCGCTGCT GGGCTTGGCT CATGAGTGTC AGAAAGTAGA TCGACTGGCG 
CAGGCCATTT GGGATGTACC GCTACAGGGC ACGGTATCGG ACAAGCAATG GTATTTGACG 
CAGAGGCTCT GA 

 

Protein sequence

MISAQSLTRP QLRRQLRKAR RVLTRSQQRA AARGLYQQLA QHPLFRRARH VSLYLPMDGE 
IDPRLLLREA QRRGKATYLP VLNAWPRTRM VFQRVRPGEK FIPNRFRIPE PRINRTKQRP 
VWALDLVLMP LVGFDDEGGR LGMGGGFYDR SLAYLARRKT WRKPALLGLA HECQKVDRLA 
QAIWDVPLQG TVSDKQWYLT QRL