Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5223 |
Symbol | pepP |
ID | 1186908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5946374 |
End bp | 5947708 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396542 |
Product | Xaa-Pro aminopeptidase |
Protein accession | NP_794954 |
Protein GI | 28872335 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA TTCCGAAGGC CGAATACGCC CGCCGTCGCA AGGCCCTGAT GGCGCAGATG GAGCCGAACA GCATCGCTAT TCTGCCGGCC GCTGCGGTGG CGATTCGTAA TCGTGATGTC GAGCATGTTT ACCGGCAGGA CAGCGACTTT CAGTACCTGA GCGGCTTTCC CGAGCCGGAA GCGGTGGTGG TGCTGATTCC CGGACGCGAA TATGGCGAGT ACGTGTTGTT CTGCCGTGAG CGCAATCCCG AGCGTGAATT GTGGGATGGC TTGCGCGCCG GGCAGGAAGG TGCGATTCGC GATTTCGGTG CGGATGATGC TTTCCCGATC AACGACATCG ACGAAATTCT GCCGGGGCTG ATCGAAGGCC GTGACCGGGT GTATTCGGCG ATGGGCAGCA ACCCCGAATT CGACCGGCAC CTGATGGACT GGATCAACGT GATTCGCTCC AAGGCGCACC TCGGTGCCCA GCCGCCCAAG GAATTCGTTG CGCTGGACCA CCTGCTGCAT GACATGCGCC TCTACAAGTC GGCGGCGGAA GTCAAAGTCA TGCGCCGCGC CGCAGACATC TCGGCGCGGG CCCATGTGCG GGCGATGCAG GCCTGCCGTG CCGGTCTGCA CGAGTTCAGC CTTGAAGCCG AGCTGGATTA CGAGTTCCGC AAGGGCGGCT CGAAGATGCC GGCCTACGGC TCCATCGTCG CCTCAGGTCG CAACAGTTGC ATCCTGCATT ACCAGCAGAA CGATGCTGTC TTGCGCGACG GTGATCTGGT GCTGATCGAC GCGGGCTGCG AAATCGATTG TTATGCCAGT GACATCACCC GCACTTTTCC GGTGAGCGGC ACGTTTTCGC CCGAGCAAAA AGCTATTTAT GAACTGGTGC TCAAGTCTCA ACTCGCAGCG TTCGAGGCCA TCGGCCCCGA CAGGCACTGG AACCAGGCGC ACGAAGCGAC GGTCCAGGTT ATTACCGCAG GGCTGGTCGA GTTGGGCCTG CTGCGCGGCG ATGTCGATCA GTTGATCGAG AGTGAGGCCT ACAAGATGTT TTACATGCAC CGTGCCGGAC ACTGGCTGGG CATGGACGTG CACGATGTCG GCGAGTACAA GGTCGGCGGC GAGTGGCGCG TACTGGAGGT TGGTATGACG CTGACCGTCG AACCGGGAAT CTACATATCC CCCGACAACC TGGAAGTCCC GAAGAAATGG CGAGGTATTG GCGTGCGAAT CGAGGATGAC GTTGTGGTAA CCCGACAGGG CTGTGAAATT CTGTCCGGCG GCGTGCCCAA GACCGTGGCC GAGATCGAGG CGTTGATGGC TGCTGCCAGG GTGCAGGTCG CATGA
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Protein sequence | MTQIPKAEYA RRRKALMAQM EPNSIAILPA AAVAIRNRDV EHVYRQDSDF QYLSGFPEPE AVVVLIPGRE YGEYVLFCRE RNPERELWDG LRAGQEGAIR DFGADDAFPI NDIDEILPGL IEGRDRVYSA MGSNPEFDRH LMDWINVIRS KAHLGAQPPK EFVALDHLLH DMRLYKSAAE VKVMRRAADI SARAHVRAMQ ACRAGLHEFS LEAELDYEFR KGGSKMPAYG SIVASGRNSC ILHYQQNDAV LRDGDLVLID AGCEIDCYAS DITRTFPVSG TFSPEQKAIY ELVLKSQLAA FEAIGPDRHW NQAHEATVQV ITAGLVELGL LRGDVDQLIE SEAYKMFYMH RAGHWLGMDV HDVGEYKVGG EWRVLEVGMT LTVEPGIYIS PDNLEVPKKW RGIGVRIEDD VVVTRQGCEI LSGGVPKTVA EIEALMAAAR VQVA
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