Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5218 |
Symbol | |
ID | 1186903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5940101 |
End bp | 5940682 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637396537 |
Product | hypothetical protein |
Protein accession | NP_794949 |
Protein GI | 28872330 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAACG AGTCGATCCG GTATCTGATC GTGCCAGGCT GGCAAGGGTC TCCTGATGAT CATTGGCAGG CCCATTGGCA AAACAGCCTG CCCAACAGTA CACGCGTAGA ACAAGCCGAC TGGCTCAAAC CGCGCCGTGA AGACTGGGTG GGCGAGCTGC AGCGCACCAT TGCCGCGCAG AGCACGCCAG TGATCCTGAT CGCCCATAGC CTGGGTTGCG TGACGGTCGC GCACTGGGCG CAACTCGCGC CGCTGGAAAC CCTTCGCCAG GTGCAAGGCG CGTTGCTGGT TGCGCCTGCC GATGTCGAGC GTCCGAACTG CCCCCCTGCA TTGCGCAACT TCGCGCCGAT TCCTGCCGAT CTGCTGCCGT TTCCGACGCA GGTTGTCAGC TCCGACAACG ACCCTGCCGT CAGCTCCCAG CGCGCTATTG AAATGGCTCG TCATTGGGGT GCAGAGCTTG GGTTTCTGAG CCAGGCCGGG CATATCAACG TCAAGTCCGG TCATCAACGC TGGGAGCAGG GCTTCGCTTA TCTGTACCGG CTGCAAAATC GTCTGGAGCA GCACGCGCGT CGTCGCGCAT GA
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Protein sequence | MHNESIRYLI VPGWQGSPDD HWQAHWQNSL PNSTRVEQAD WLKPRREDWV GELQRTIAAQ STPVILIAHS LGCVTVAHWA QLAPLETLRQ VQGALLVAPA DVERPNCPPA LRNFAPIPAD LLPFPTQVVS SDNDPAVSSQ RAIEMARHWG AELGFLSQAG HINVKSGHQR WEQGFAYLYR LQNRLEQHAR RRA
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