Gene PSPTO_5218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5218 
Symbol 
ID1186903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5940101 
End bp5940682 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID637396537 
Producthypothetical protein 
Protein accessionNP_794949 
Protein GI28872330 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAACG AGTCGATCCG GTATCTGATC GTGCCAGGCT GGCAAGGGTC TCCTGATGAT 
CATTGGCAGG CCCATTGGCA AAACAGCCTG CCCAACAGTA CACGCGTAGA ACAAGCCGAC
TGGCTCAAAC CGCGCCGTGA AGACTGGGTG GGCGAGCTGC AGCGCACCAT TGCCGCGCAG
AGCACGCCAG TGATCCTGAT CGCCCATAGC CTGGGTTGCG TGACGGTCGC GCACTGGGCG
CAACTCGCGC CGCTGGAAAC CCTTCGCCAG GTGCAAGGCG CGTTGCTGGT TGCGCCTGCC
GATGTCGAGC GTCCGAACTG CCCCCCTGCA TTGCGCAACT TCGCGCCGAT TCCTGCCGAT
CTGCTGCCGT TTCCGACGCA GGTTGTCAGC TCCGACAACG ACCCTGCCGT CAGCTCCCAG
CGCGCTATTG AAATGGCTCG TCATTGGGGT GCAGAGCTTG GGTTTCTGAG CCAGGCCGGG
CATATCAACG TCAAGTCCGG TCATCAACGC TGGGAGCAGG GCTTCGCTTA TCTGTACCGG
CTGCAAAATC GTCTGGAGCA GCACGCGCGT CGTCGCGCAT GA
 
Protein sequence
MHNESIRYLI VPGWQGSPDD HWQAHWQNSL PNSTRVEQAD WLKPRREDWV GELQRTIAAQ 
STPVILIAHS LGCVTVAHWA QLAPLETLRQ VQGALLVAPA DVERPNCPPA LRNFAPIPAD
LLPFPTQVVS SDNDPAVSSQ RAIEMARHWG AELGFLSQAG HINVKSGHQR WEQGFAYLYR
LQNRLEQHAR RRA