| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5195 |
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| Symbol | |
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| ID | 1186880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5913818 |
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| End bp | 5914837 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396514 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | NP_794926 |
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| Protein GI | 28872307 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTC CCTTTCAACG CCCGGCCCTG ACGGTACTGG CGGCGGCACT CGGGCTGTTC
GGCGTACTGC TCAGCAGCGG TGCGCAGGCC GAAGGCAAGA TCAGCATCGC TCAGCAATTC
GGCATCGGTT ATCTGATCCT CGACGTGGTG CGTGATCAGA AACTGATCGA GAAACACGGC
AAGGAACAGG GCCTGGACAT CAAGGTCGAC TGGAACAGCA TCTCTGGCGC CACGGCAATG
AACGAGGCGC TGCTGGCCGG CGCGCTGGAC GTGGTGTCGG CAGGCGTACC GCCGATGCTG
ACCATCTGGG ACCGCACCAA GGGCAAGCAG AACGTCAAGG CCATCGCTTC GCTGGGCTCG
ATGCCCAACT ACCTGCTGAC CAACAACCCC AACGTGAAAA CCATCAAGGA CTTCACTGAC
AAGGACCGCA TCGCCGTGCC TGCTGCGGGT GTGGGCTTCC AGTCGCGTAC CTTGCAGATC
GAGACCGCCA AACTGTTCGG TAACGACAAC TACAAGAAAT TCGACAACAT CTCGGTGAGT
CTGGCGCACC CGGACGCCAC CGCAGCATTG CTGGCGGGCG GTTCGGAAAT CAACTCGCAC
TTCTCCAGCC CGCCGTTCCA GTACCAGGCG CTGGAAAACC CCAACGTCCC CAAGGTGCTC
AGCTCCTATG ACGTGCTAGG CGGTCAGGCC ACGTTCAACG TGCTCTACAC CACGGAAAAA
TTCCACGACC AAAACCCCAA GACCTACAAG GCGTTCTACG ACGCACTGGC CGAAGCCGAG
AAAATCATCA AGGCCGACAA ACCGGCAGCG GCGCAGACCT ACATCCGCGT CGAGCAGTCG
AAACTGCCGC TGTCGCTGGT AGAGAAAATC GTTTCCGACC CGGAAATCGA CTTCACCATC
ACCCCGCAGC GCACCTTCAT CTACGCCGAG AAACTGCATG AACTGGGCGT GTTGAAAAAC
AAAGCGGCGA GCTGGAAGGA TTACTTCTTC GAAGAGGCGC AGGGTACTGA GGGCAGTTGA
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| Protein sequence | MTIPFQRPAL TVLAAALGLF GVLLSSGAQA EGKISIAQQF GIGYLILDVV RDQKLIEKHG
KEQGLDIKVD WNSISGATAM NEALLAGALD VVSAGVPPML TIWDRTKGKQ NVKAIASLGS
MPNYLLTNNP NVKTIKDFTD KDRIAVPAAG VGFQSRTLQI ETAKLFGNDN YKKFDNISVS
LAHPDATAAL LAGGSEINSH FSSPPFQYQA LENPNVPKVL SSYDVLGGQA TFNVLYTTEK
FHDQNPKTYK AFYDALAEAE KIIKADKPAA AQTYIRVEQS KLPLSLVEKI VSDPEIDFTI
TPQRTFIYAE KLHELGVLKN KAASWKDYFF EEAQGTEGS
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