Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5177 |
Symbol | |
ID | 1186862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5892760 |
End bp | 5893467 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637396496 |
Product | hypothetical protein |
Protein accession | NP_794908 |
Protein GI | 28872289 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGGC CTTTAGACGA CAACATTCAT GACCTGGCTG GCGAGTATGT GCTCGGCACC CTGTCAGCGC AGCAAAGGCT CGACGTGCAG CGTCGCCTGC CCCGCGAGCC AGACTTGCAG GCGGCCATCG ATGCCTGGGA GCAACGCCTG TTGCCCCTGA CCGAACTGGC CGACCCCGTC ACGCCATCGC CCGGCCTGTG GGAACGCATC GAACGCAACC TGCAGGACAT GACCGCGCCG GCCAAACCGG CACACAGGCC GCGCGTGCGC TGGTGGAACA ACCTGTCGGT CTGGCGCGGT TTGGCCGGCG CGGGGCTGGC CGCATCGCTG GTGCTGGGCA TGACCCTGCT GACCCGCGCA CCGGCGCAGC CGTCCTACCT CGTGGTGCTC GTCGGGCCGC AGGACAAAGC CCCCGGCTGG GTCGTGCAAG CCAGCAACTC ACAGCAGATA CAGCTTATTC CGCTGGGTGT GGTTGAAGTC CCGGCCGACA AGGCGCTGGA GTTCTGGACC AGGGGCGACG ACTGGCAAGG CCCGGTATCC CTCGGGCTGG TCAAACCGGG GCAGAGCCTG AGCATTGCAC TGGACAAACT GCCGCCGTTG CAAGCCAATC AGTTGTTCGA GCTGACCCTG GAGACCTCCA CCGGCTCGCC AATCGGCAAA CCGACCGGCC CGATTCAGTT CATCGGCCGG GCGGTGAAGG TCATCTGA
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Protein sequence | MTRPLDDNIH DLAGEYVLGT LSAQQRLDVQ RRLPREPDLQ AAIDAWEQRL LPLTELADPV TPSPGLWERI ERNLQDMTAP AKPAHRPRVR WWNNLSVWRG LAGAGLAASL VLGMTLLTRA PAQPSYLVVL VGPQDKAPGW VVQASNSQQI QLIPLGVVEV PADKALEFWT RGDDWQGPVS LGLVKPGQSL SIALDKLPPL QANQLFELTL ETSTGSPIGK PTGPIQFIGR AVKVI
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