| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5171 |
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| Symbol | |
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| ID | 1186856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5887357 |
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| End bp | 5888721 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396490 |
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| Product | Atz/Trz family protein |
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| Protein accession | NP_794902 |
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| Protein GI | 28872283 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCCT TCTTTGCCGA GCGTGCGCTA CTTCCCGACG GCTGGGCCAG CAATGTGCGT
CTGGAGGTCA GCCAGGAAGG TGTATTGACC CGCGTCGAGG CCAATGCGGA CCGGCAGGGT
GCCGACATTG TCAGCGGGCC TTTGCTGCCT GGCATGCCGA ACCTGCATTC CCACGCGTTT
CAGCGGGCGA TGGCCGGGCT GGCCGAGGTG GCGGGCAACC CCAACGACAG TTTCTGGACG
TGGCGCGACC TCATGTACCG GCTGGTCGGG CGCATCAGCC CGCAGCAACT GGGCGTCATT
GCCCGACAGC TGTACATCGA GATGCTTAAG GGCGGCTATA CCTCGGTCGC CGAATTTCAT
TACGTGCATC AGGACCTGGA CGGCAAACCC TACGCAGATC CTGCCGAACT GGCGGTGCAG
ATCAGCCAGG CGGCGAGTTC GGTCGGCATC GGCCTGACGT TGCTGCCGGT GCTTTACAGC
CATTCGGGGT TTGGCGGGCA GGTGCCGAAC GAAGGCCAGC GCCGGTTTAT CCACAGTAGC
GACAGCTATC TGGACTTACA GGCACGCCTG CGACCGGTGC TGGCGGCTCA GCCAGCGCAG
CAGTTGGGGC TGTGCTTCCA TTCGCTGCGT GCGGTAACCC CACAGCAGAT CAGTGAAGTG
CTGGCGGCCA GCGACCCGCA ATGCCCGGTG CATATTCATA TCGCCGAGCA GCAGAAGGAG
GTCGATGACT GCCTGAGCTG GAGCGGGCGA CGTCCGCTGC AATGGCTGTA TGAAAACACC
CCTGTGGATA ACCGCTGGTG CCTGGTCCAT GCGACCCACG CCGACGCGCA TGAAGTGCAA
CTGATGGCGC AAAGTGGTGC GGTGGCTGGA TTGTGTCTGA CCACCGAGGC GAACCTTGGC
GACGGGATCT TTCCGGCGGT GGACTACGTC GCGCAGGGCG GTCGTTGGGG GATTGGTTCG
GACAGTCACG TCTCGCTCAG TGTGGTCGAG GAGCTGCGCT GGCTGGAATA CGGCCAGCGT
CTACGCGATC AACGCCGTAA CCGGCTGTAT CGCAGTGACC AGCCGATGGT TGGCCGCACG
CTCTACGACG CCGCACTGGC AGGCGGCACG CAGGCGCTGG GTCAGCAGGT TGGTGCACTG
CAAGCAGGGC AACGCGCCGA CTGGCTGGTG CTGGATGGCA ACGACCCATA CATCGCCACC
GCCTCGGGAG ACGCAATTCT CAACCGCTGG TTGTTCGCGG GCAGCGACCG GCAGATTCGC
GACGTGGCGG TGAATGGACG CTGGGTGATA CGCGAAGGGC GACATGCCGG CGAAGAGCAA
AGCAGCCGTG AGTTCGCGCA GGTGTTGAGG GAGTTGCTGG GCTGA
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| Protein sequence | MSAFFAERAL LPDGWASNVR LEVSQEGVLT RVEANADRQG ADIVSGPLLP GMPNLHSHAF
QRAMAGLAEV AGNPNDSFWT WRDLMYRLVG RISPQQLGVI ARQLYIEMLK GGYTSVAEFH
YVHQDLDGKP YADPAELAVQ ISQAASSVGI GLTLLPVLYS HSGFGGQVPN EGQRRFIHSS
DSYLDLQARL RPVLAAQPAQ QLGLCFHSLR AVTPQQISEV LAASDPQCPV HIHIAEQQKE
VDDCLSWSGR RPLQWLYENT PVDNRWCLVH ATHADAHEVQ LMAQSGAVAG LCLTTEANLG
DGIFPAVDYV AQGGRWGIGS DSHVSLSVVE ELRWLEYGQR LRDQRRNRLY RSDQPMVGRT
LYDAALAGGT QALGQQVGAL QAGQRADWLV LDGNDPYIAT ASGDAILNRW LFAGSDRQIR
DVAVNGRWVI REGRHAGEEQ SSREFAQVLR ELLG
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