Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5141 |
Symbol | hslU |
ID | 1186826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5851651 |
End bp | 5852988 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637396461 |
Product | heat shock protein HslVU, ATPase subunit HslU |
Protein accession | NP_794873 |
Protein GI | 28872254 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATGA CTCCCCGCGA AATCGTCCAC GAACTCAACC GCCATATCAT CGGCCAGGAC GATGCCAAGC GCGCCGTTGC CATTGCCCTG CGCAACCGCT GGCGGCGCAT GCAGTTGCCC GAAGAACTGC GTGTTGAAGT GACGCCCAAG AACATCCTGA TGATCGGCCC GACCGGTGTC GGCAAGACCG AAATCGCCCG GCGCCTGGCC AAGCTCGCCA ATGCGCCGTT CATCAAGGTC GAAGCGACCA AATTCACCGA AGTGGGCTAT GTAGGCCGTG ATGTCGAGTC GATCATCCGT GATCTGGCCG ATGCTGCCAT CAAGCTGCTG CGTGAACAGG AAATCGTCAA GGTACGCCAC CGCGCCGAAG ACGCTGCTGA AGACCGCATC CTCGACGCCC TGCTGCCGCC TGCCCGCGTC GGTTTCAACG AAGACCCGGC GCAAAGTAAC GATTCCAACA CCCGTCAGCT GTTCCGCAAG CGCCTGCGTG AAGGCCAGCT GGACGACAAG GAAATTGAAA TCGAGATCAA CGAAGCCGTT GGTGTCGACA TTTCCGCGCC GCCCGGCATG GAAGAAATGA CTAATCAGCT GCAGAGCCTG TTTGCCAACA TGGGCAAAGG CAAGACCAAG AGCCGCAAGC TCAAGGTCAA GGAAGCACTC AAGCTGGTGC GCGAAGAAGA AGCCGGGCGT CTGGTCAACG ACGAAGAGTT GAAGGTCAAG GCGCTGGAAG CGGTCGAGCA ACACGGCATC GTGTTCATCG ACGAAATCGA CAAAGTAGCC AAGCGTGGTA ACTCGGGCGG CGTCGATGTG TCCCGTGAAG GCGTGCAGCG CGACCTGCTG CCGCTGATCG AGGGCTGCAC GGTGAACACC AAGCTGGGCA TGGTCAAGAC CGACCACATC CTGTTCATCG CCTCGGGTGC GTTCCACCTG AGCAAGCCGA GTGATCTGGT ACCCGAGCTG CAAGGCCGCC TGCCCATCCG TGTTGAGCTC AAAGCGCTGT CGCCACAGGA CTTCGAGCGC ATCCTCACCG AGCCACACGC TTCGCTGACC GAGCAATACC GCGAACTGCT CAAGACCGAA GGCCTGAAAA TCGAATTCAA GCCCGATGGC ATCAAACGTC TGGCCGAGAT TGCCTGGCAG GTCAACGAGA AGACCGAGAA CATCGGCGCC CGACGCCTGC ACACGCTGCT TGAGCGTCTG CTGGAAGAAG TTTCGTTCAG CGCAGGCGAC CTGGCGATCA GCCCGGACGC AGCGCCTATC GAAATCGATG CCGACTACGT CAACAGCCAT CTTGGCGATC TGGCGGAAAA CGAAGACCTG TCGCGCTATA TTCTTTAA
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Protein sequence | MSMTPREIVH ELNRHIIGQD DAKRAVAIAL RNRWRRMQLP EELRVEVTPK NILMIGPTGV GKTEIARRLA KLANAPFIKV EATKFTEVGY VGRDVESIIR DLADAAIKLL REQEIVKVRH RAEDAAEDRI LDALLPPARV GFNEDPAQSN DSNTRQLFRK RLREGQLDDK EIEIEINEAV GVDISAPPGM EEMTNQLQSL FANMGKGKTK SRKLKVKEAL KLVREEEAGR LVNDEELKVK ALEAVEQHGI VFIDEIDKVA KRGNSGGVDV SREGVQRDLL PLIEGCTVNT KLGMVKTDHI LFIASGAFHL SKPSDLVPEL QGRLPIRVEL KALSPQDFER ILTEPHASLT EQYRELLKTE GLKIEFKPDG IKRLAEIAWQ VNEKTENIGA RRLHTLLERL LEEVSFSAGD LAISPDAAPI EIDADYVNSH LGDLAENEDL SRYIL
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