| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5115 |
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| Symbol | |
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| ID | 1186800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5815715 |
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| End bp | 5817064 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396435 |
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| Product | gluconate transporter family protein |
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| Protein accession | NP_794847 |
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| Protein GI | 28872228 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCGT CACCCGGTAT TTCGCTGTTG GTCTACGCCG CTGTCGCAAT CATTGCCTTG
ATCGTGCTGA TCGCGCGGTA TCGGCTCAAT CCATTTATTG TCATTACGCT TGTTTCGGTC
GGGCTGGCGC TGGTTGCAGG GATGCCGGCC AGTGGCGTGG TTGCCTCTTA TGAGGCCGGG
GTTGGCAAAA CGCTGGGGCA TATCGCGCTG GTTGTGGCGC TGGGCACCAT GCTTGGCAAG
ATGATGGCCG AGTCCGGCGG GGCCGAGCAG GTGGCGCGCA CGCTGATTGA CCGCTTTGGT
GAGCGTAATG CGCACTGGGC CATGGTCTGT ATTGCGTTTC TGGTCGGCTT GCCGCTGTTT
TTTGAAGTGG GTTTTGTGCT GCTGGTGCCG ATTGCGTTTA CCGTAGCGCG TCGTGTCGGG
GTGTCGATTC TGATGGTCGG CCTGCCGATG GTGGCCGGTC TGTCGGTGGT ACACGCGCTG
GTGCCGCCGC ACCCTGCGGC GATGCTGGCC GTTCAGGCTT ATCAGGCGTC GGTGGGGCAG
ACCCTGTTTT ACGCCATTCT GATCGGCATA CCCACGGCAA TCATTGCAGG GCCCGTGTAT
GCCAAATTTA TCGTGCCGCG CATCCATTTG CCGGCTGAAA ACCCGCTGGC GAAGCAGTTT
CTCGACCGGG AACCCCGTGC AAAGCTGCCC AGCTTCGGCC TGACCATGGC GACCATCCTG
TTGCCGGTGG TGCTGATGTT GTTGGGCGGC TGGGCGAACC TGATCAGCGC GCCGGGCAGC
GCGTTCAATG GCTTTCTGTT GTTCATCGGC AACTCGGTGA TCGCTCTGCT GCTGGCCACT
TTGCTGAGCT TCTGGACGCT GGGCATCGCT CAAGGATTCA ATCGCGACTC GATTCTGAAA
TTCACCAATG AGTGCCTGGC ACCTACCGCC AGTATCACCT TACTGGTCGG CGCCGGTGGC
GGTTTGAACC GTATTCTGGT CGACAGCGGC GTGACCAACC AGATCGTCGG TCTGGCGCAG
GACTTTCATC TGTCGCCCTT GCTGATGGGC TGGCTGTTCG CAGCACTGAT GCGTGTGGCG
ACGGGCTCGG CGACGGTGGC GATGACCACC GCATCGGGGA TCGTTGCGCC TGTGGCAATG
GGCCTGGGTT ACCCACATCC CGAGTTGCTG GTGCTGGCGA CGGGCGCAGG CTCGGTAATC
TTTTCCCACG TCAACGACGG CGGTTTCTGG CTTATCAAGG AATACTTCAA CATGACCGTA
GCGCAAACAT TCAAGACCTG GACGGTACTG GAGACGCTGA TTTCCGTTGT CGCCTTTGCC
TTGACGCTTG GCCTGGCGCA GGTGCTCTGA
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| Protein sequence | MSPSPGISLL VYAAVAIIAL IVLIARYRLN PFIVITLVSV GLALVAGMPA SGVVASYEAG
VGKTLGHIAL VVALGTMLGK MMAESGGAEQ VARTLIDRFG ERNAHWAMVC IAFLVGLPLF
FEVGFVLLVP IAFTVARRVG VSILMVGLPM VAGLSVVHAL VPPHPAAMLA VQAYQASVGQ
TLFYAILIGI PTAIIAGPVY AKFIVPRIHL PAENPLAKQF LDREPRAKLP SFGLTMATIL
LPVVLMLLGG WANLISAPGS AFNGFLLFIG NSVIALLLAT LLSFWTLGIA QGFNRDSILK
FTNECLAPTA SITLLVGAGG GLNRILVDSG VTNQIVGLAQ DFHLSPLLMG WLFAALMRVA
TGSATVAMTT ASGIVAPVAM GLGYPHPELL VLATGAGSVI FSHVNDGGFW LIKEYFNMTV
AQTFKTWTVL ETLISVVAFA LTLGLAQVL
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