| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5111 |
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| Symbol | |
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| ID | 1186796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5811163 |
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| End bp | 5812056 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396431 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_794843 |
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| Protein GI | 28872224 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGC GCCATCTGCG TTACTTCATC GCAGTTGCCG AAGAGCTGCA TTTCGGCCGT
GCAGCACTGG CGCTGGGCAT TTCTCAGCCG CCACTCAGCC AGCAGATTCA GGCGCTGGAG
CAGGAACTGG GTACGCGTCT GTTCGAGCGC ACCAACCGGC GCGTTGAGTT GAGCGAATCC
GGGCGGCTGT TTCTTGATGA GGCGCGTCTG GTGTTGGCCC AGGTTGATAA AGCCACTGAT
GTCGCCCGAC GCGCGCAACT GGGTGAAATC GGTGAGCTGA AGATCGGCTT TACATCGTCT
GCGCCGTTCA CTTCCAGCAT TCCGCAGGCG ATCTTTGCGT TCCGCCAGGC CTACCCCGAC
GTGCACCTGA CCCTGACCGA AATCACCAGC CAGGAAGTGG CCGCAGGGCT TGAAGACAAG
ACCATACAGG TCGGCATCAT GCGCCCGCTG GCGTTGCCTG ATTCACTGGT GGTGTTTGAA
TTGCTGAACG AACCGCTGGT AGCCATCATG CGTGCCGACC ATCCGCTGGC GGCCAGCACC
GAGGACGGAA TCTACATGGC AGCGCTGGCC GCCGAGCCCT TTGTGTTCTT TCCACGCACC
TATGGCAGTG GCATCTACGC ACAGGTCCTG AGCCTGGCCC GCGCCGCAGG GTTCAGCCCG
TTGATCACTC AGGAAGCAGG GGAAGTGATG ACCATCATTG GCCTGGTCGC AGCCGGCTTG
GGCGTGACGG TGTTGCCTGC GTCCTACCGC CGAATGCGCA TCGACAGCGT GGTCTACCGC
AACGTCCTCG ACCCCGGCGC GACCAGCGCG GTGTGGCTGG TGCAGCGCAA GGACGAACAG
TCACCGATGG CCAAGGCGTT TACCGAACTC TTGACGCGGA GCGTCGCACG GTAG
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| Protein sequence | MELRHLRYFI AVAEELHFGR AALALGISQP PLSQQIQALE QELGTRLFER TNRRVELSES
GRLFLDEARL VLAQVDKATD VARRAQLGEI GELKIGFTSS APFTSSIPQA IFAFRQAYPD
VHLTLTEITS QEVAAGLEDK TIQVGIMRPL ALPDSLVVFE LLNEPLVAIM RADHPLAAST
EDGIYMAALA AEPFVFFPRT YGSGIYAQVL SLARAAGFSP LITQEAGEVM TIIGLVAAGL
GVTVLPASYR RMRIDSVVYR NVLDPGATSA VWLVQRKDEQ SPMAKAFTEL LTRSVAR
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