Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5095 |
Symbol | |
ID | 1186780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5795106 |
End bp | 5795651 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637396415 |
Product | hypothetical protein |
Protein accession | NP_794827 |
Protein GI | 28872208 |
COG category | [S] Function unknown |
COG ID | [COG4648] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGGC TGATTGGCCT GACTCTGGTA CTGGCCGGTG TGCTGTATCC GTTTGCCGTT TACTGGGGCA CCGAGCACTT CGCCCCGTGG CAGTTCGCGC TGCTGCTTGG CAGCCTGTGG CTGGCGCGTG CGCTGACCGG CGAACGCAAA CCCGGCAGCC TGGCGATGGC GAGTGTGGCC CTGGCCTTTT GCGTGGTGCT CGGTGTGCTC GACAGCCATT TGATGCTGCG CTGGTACCCG GTGCTGGTCA GCACGTTCAT GCTCGGTCTG TTTGGCTCGA GCCTGATCTA CGGTCCGCCG ATCGTGGAAA GAATGGCGCG CATCACCCGC CCGCAACTGC CCGAATCCGG CATCCGCTAC ACCCGCAAAG TCACACAGAT CTGGTGCCTG TTCTTTCTGG CCAATGGCCT GACTGCAGCG ATGCTCACGC TGTGGGCACC GTTGTCGTGG TGGGCGCTGT ACACCGGCCT GATTTCCTAT GGATTGATGG GGCTGCTGTT CGCCGCTGAA TGGATAGCTC GCCCACCCGC TACGGACGGC AAATGA
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Protein sequence | MKRLIGLTLV LAGVLYPFAV YWGTEHFAPW QFALLLGSLW LARALTGERK PGSLAMASVA LAFCVVLGVL DSHLMLRWYP VLVSTFMLGL FGSSLIYGPP IVERMARITR PQLPESGIRY TRKVTQIWCL FFLANGLTAA MLTLWAPLSW WALYTGLISY GLMGLLFAAE WIARPPATDG K
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