Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5085 |
Symbol | mdcC |
ID | 1186770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5788447 |
End bp | 5788746 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396405 |
Product | malonate decarboxylase, delta subunit |
Protein accession | NP_794817 |
Protein GI | 28872198 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03130] malonate decarboxylase acyl carrier protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACCC TGTCTTTTGA ATTCCCCGCC GGACAGCCGC CCAAAGGCCG TGCGCTGGTG GGCGTGGTCG GTTCCGGTGA TCTGGAAGTA CTGCTGGAGC CTGGTCAGCC AGGCAAATTG TCGATTCAGG TGGTGACCTC GGTCAACGGT GCCTCGCTGC GCTGGAAACA TCTTTTCGAG CGCATGTTCG ATGGCCAGAC CCCGCCCGCG CTGAGCATCG ACATTCATGA CTTCGGCGCA ACGCCTGGCG TGGTGCGTCT GCGTCTGGAG CAGGGTTTCG AGGAGATCGG CCATGACTGA
|
Protein sequence | METLSFEFPA GQPPKGRALV GVVGSGDLEV LLEPGQPGKL SIQVVTSVNG ASLRWKHLFE RMFDGQTPPA LSIDIHDFGA TPGVVRLRLE QGFEEIGHD
|
| |