| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5076 |
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| Symbol | |
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| ID | 1186761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5781466 |
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| End bp | 5782185 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396396 |
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| Product | conserved hypothetical protein TIGR00046 |
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| Protein accession | NP_794808 |
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| Protein GI | 28872189 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTGT CCCGCTTTTT CACTGAAACG CCGCTGAGCC TGGGCGAGCA CGAACTGCCT
GAAGCCCAGG CGCATTACAT CAGCCGTGTG CTGCGCATGA CCGAGGGCGA TGCCCTGCAA
CTGTTCGATG GCTCAGGCCA GGAGTTTAGC GGCACGCTGC TGGAGGTCGG CAAGAAACGC
GTGCGTGTGC AACTGACTGA ACGCTTTGCC GGGCAGGTTG AATCAGGTTT GCGCATTCAT
CTGGGTCAGG GCTTGTCACG TGGCGAGCGC ATGGACTGGG CGATTCAGAA GGCGACCGAG
CTGGGCGTCA GCGAGATCAC GCCAATTGTC AGCGAGCGTT GCGAAGTGCG CCTCAAGGAC
GAGCGCGCCG AGAAGCGCCA GGCGCACTGG CAGCAGATCG CAATCAGCGC GTGCGAGCAA
TGCGGTCGCT CGGTGGTGCC GGTCATTCAC CCACCGATGC CGCTGGCCGA CTGGATCAAG
CTCACCGAGG CCGACCTGAA ACTGGTGCTG CACCCGGTGG CCGAACCGCT GACCAGCCAT
GCCAAACCCG CCAGCCTGGC CTTTCTGATC GGCCCGGAAG GTGGCTTGAA TGACGCAGAA
GTCGATCAGG CACAAAACGC TGGCTTCCAC GCCGCCCGCC TCGGCCCGAG AGTCCTGCGC
ACCGAAACCG CCCCGGTAGT TGCGCTCAGC GTGGCGCAGC AGTTGTGGGG CGATTTCTGA
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| Protein sequence | MRLSRFFTET PLSLGEHELP EAQAHYISRV LRMTEGDALQ LFDGSGQEFS GTLLEVGKKR
VRVQLTERFA GQVESGLRIH LGQGLSRGER MDWAIQKATE LGVSEITPIV SERCEVRLKD
ERAEKRQAHW QQIAISACEQ CGRSVVPVIH PPMPLADWIK LTEADLKLVL HPVAEPLTSH
AKPASLAFLI GPEGGLNDAE VDQAQNAGFH AARLGPRVLR TETAPVVALS VAQQLWGDF
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