Gene PSPTO_5055 details

Gene Information

• Locus tag: PSPTO_5055
• ID: 1186740
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5754554
• End bp: 5756578
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637396376
• Product: hypothetical protein
• Protein accession: NP_794788
• Protein GI: 28872169

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGGTG CCGATGAATA CGCCGTTGCC CAAGGCAACA CACGGCTGAT CCCCAACCTC 
AACACCACCT GCAAAATGGA AGTGCCCGCC GACCTGCCGG GCGTGGTGAT CTTTCTGCAT 
GGTGTGAATG ATCCGGGGGC TTCTTATGAG TCGGTGGAGA CGGGGTTGTG TCAGGGGGTG 
AATGAGCGGC TGGATCGGCC GGATCTGGTG CCGGGGCGGT ATGGGGGAAA ATACAAAGAA 
GCAGGAAACG TCCCCTACGA GAAAAGGGAC AGTGACCAGA AAGTCATCCT CGATGATCCT 
GATACTTATC TCTACCGGCG CGACGCATCT GATCCGAAAA CCCATAGCCT GCTAATTCCC 
TTTTATTGGG GACATCGGGC AGCACCCGAT CAAATCAAGC GTGATGACGC GGGCGACCCG 
TTCAGAATGC GTAATCAGTT TCAGGACATT AATGGCAACC GGCTGGATCG CCACTTTGCC 
AAAGCGGGAG GGTTTATTGC CAACGCGACC AATAACATAC CGGATGTCTA TGGTGAAGGT 
TTTAGGCCCA ATCTGAAAAG CATCGCTCTG GAAACGTTCA AGCCAGACAA CGCTTTGTAT 
TTTGGTCACT CGCCAGCGCG GCACTATTGC GTATTGGCGG CTCACCGTTT GGCTATGCTG 
ATACGCGAGA TCCGTCGCGT GTCGCCTGAC GAGACCATAA CAATCATGGG CCACAGCCAA 
GGCACGATAG TCACCTTGCT GGCGCAAGCG TTGCTGGTAG ATGGGGGAGA CCGTTGCGCA 
GATACTTTTA TCATGGTTGA TACGCCTTAT TGTGTGTTGC CTGGTAACAC TCCCAAAGAC 
CAAGACACAT TTTCAACGCT GGTCGGGATC GTAACTGCGA TAACCAATAT GCCACACACA 
CAACCAGCCA TGTCAGAACT CAGGGACGCT AAAACCTACT GCGGCAGAAG CGGTTCTCGA 
TGGTTACCCA CTCAAGGTAT CCGCAAAAAT AAAGTGGGCA GCATGACGGT CTTTCCCGAG 
CGCGATAACC GAGGAAAGGT GTATCTGTAT TTCTGCCCGG ATGACACCAC TGTCTCACTG 
GATGACGTCC AAGGCATCGG GACCTATGGA ATGCCTGATG CTCTACCTGA TGGACGAATG 
GCAATGATGG TGCTCCCGCA ACTACGCTTC TACCAACGCA TGTGGACTAA GCGCCATCGC 
TATGGCGAGG CGATCCTGAT CGGCAACACG CCACAACCTG AACTCATGCG TGCCACAGGC 
GAAGCTCGAT ACCCAGGTAG CTCATTTGGA GCCGGTATGA TTGCTCGCGC GCCTATCCTG 
GAGGGGCAAG AGCGCCTTAT CAATGCAGAA GCGCTGAGTC CGCCTCATGA ACCAGAAATG 
TTCGGCGGCG AAGCGAGCAG GGGCACCCCG ACGACTTCAG GTTTGGACAG GCCCGACGAT 
GTTGCGAAGG GCGTTGCGCT GGGAAAGGAT GAAGCCACGT TCATGTGGGT AAGAATGCCG 
TCCGAGTACG ATTCTCCGAA CATGTCACAA CAAGAGGCAC AAAACGCTTT TAACGCATTG 
TCCGACGACC CGGAAAACCA TACTCGCGCA TTACGAAAAA TAAAATCCAC GACAAATAGT 
AGCTCTCATC ATGAAAGAGA GGAAACACCC AGAGAAGCAC GCGAACGTAT GGAGAAAAAC 
CGTGATGCCT GGAGCGAAAA CTCCTATCAC TCAGGCATAC TGCGCAGCCC GGAAAATCAT 
CGCTGGGTGA CTGCAATGGA CATCGCTATT GGCCAGGCTA AATGCTTGGA TGATCCGGCG 
ATGCGTGATG TTCTGATTGC GATTGCGGAT TGGAAAATTG ACAAAAAAGT ATTCGAGTAC 
ATTGAAAAGT TACCTGATTG GGTGCGATTG AGCCATAAAG CACAGGCTCT GGTAAAGGCT 
AGCAATGATT ATTATGTAAA AGGTAAATTC CCTCCCTCAA GTTTAGTACC TCTTACACCC 
CCACCTTTGG TCGGCCCTGC TTTAAATGCA GGAACTGTCG CATGA 

 

Protein sequence

MNGADEYAVA QGNTRLIPNL NTTCKMEVPA DLPGVVIFLH GVNDPGASYE SVETGLCQGV 
NERLDRPDLV PGRYGGKYKE AGNVPYEKRD SDQKVILDDP DTYLYRRDAS DPKTHSLLIP 
FYWGHRAAPD QIKRDDAGDP FRMRNQFQDI NGNRLDRHFA KAGGFIANAT NNIPDVYGEG 
FRPNLKSIAL ETFKPDNALY FGHSPARHYC VLAAHRLAML IREIRRVSPD ETITIMGHSQ 
GTIVTLLAQA LLVDGGDRCA DTFIMVDTPY CVLPGNTPKD QDTFSTLVGI VTAITNMPHT 
QPAMSELRDA KTYCGRSGSR WLPTQGIRKN KVGSMTVFPE RDNRGKVYLY FCPDDTTVSL 
DDVQGIGTYG MPDALPDGRM AMMVLPQLRF YQRMWTKRHR YGEAILIGNT PQPELMRATG 
EARYPGSSFG AGMIARAPIL EGQERLINAE ALSPPHEPEM FGGEASRGTP TTSGLDRPDD 
VAKGVALGKD EATFMWVRMP SEYDSPNMSQ QEAQNAFNAL SDDPENHTRA LRKIKSTTNS 
SSHHEREETP REARERMEKN RDAWSENSYH SGILRSPENH RWVTAMDIAI GQAKCLDDPA 
MRDVLIAIAD WKIDKKVFEY IEKLPDWVRL SHKAQALVKA SNDYYVKGKF PPSSLVPLTP 
PPLVGPALNA GTVA