Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5047 |
Symbol | proC |
ID | 1186732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5746623 |
End bp | 5747441 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637396368 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | NP_794780 |
Protein GI | 28872161 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.518044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA CTCGTATCGC CTTCGTCGGC GCCGGAAACA TGGCTGCCAG CCTGATCGGC GGCCTGCGCG CGCAAGGCGT GGAAGCATCG CTGATCTGCG CCAGTGCGCC GGGTGCCGAA ACCCGTGAGC GCATTTCCAC TGAACACGGC ATCGAGGTGT TCGCCGACAA CGCCGAGGCC GTCAAGGGTG CCGACGTCGT GGTACTGGCC GTCAAACCGC AGATGATGAA AAGCGTCTGC CAGGCACTCA AGGCCAGCCT TGAAGCTCAT CAACTGATTG TCTCGGTCGC GGCGGGTATC ACCTGTGCCA GCCTGACTCA ATGGCTGGGC GACCAGCCTG TGGTGCGCTG CATGCCCAAC ACCCCCTCGC TGTTGCGTCA GGGTGCCAGC GGTCTGTATG CGACCGACAA GGTCTCGCCA ACACAACGCG AGCAGGCCGA GCAATTGCTG TCGGCTGTTG GCGTGGCAGT GTGGGTCGAG CAGGAAAAAC ACATGGATGC CGTGACAGCA GTGTCCGGCA GCGGCCCTGC CTACTTCTTT CTGATGATGG AAGCGATGAC CGCGGCAGGC GTGAAGCTGG GCCTGCCGGA AGACATCGCC AAAAAACTCA CGCTGCAAAC GGCGCTGGGC TCGGCGCTGA TCGCCACTGG CAGCAATGTG GACGCAGGCG AATTGCGTCG TCGTGTCGCC TCACCGGGCG GGACCACCGA AGCTGCGATC AAGGCCTTTC AGGCAGGCGG CTTCGAGGCG CTGGTAGAAA CAGCACTGAC CGCCGCAGAC CACCGCGCAG CCGAGCTGGC TGAGCAACTG GGCAAATAA
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Protein sequence | MSKTRIAFVG AGNMAASLIG GLRAQGVEAS LICASAPGAE TRERISTEHG IEVFADNAEA VKGADVVVLA VKPQMMKSVC QALKASLEAH QLIVSVAAGI TCASLTQWLG DQPVVRCMPN TPSLLRQGAS GLYATDKVSP TQREQAEQLL SAVGVAVWVE QEKHMDAVTA VSGSGPAYFF LMMEAMTAAG VKLGLPEDIA KKLTLQTALG SALIATGSNV DAGELRRRVA SPGGTTEAAI KAFQAGGFEA LVETALTAAD HRAAELAEQL GK
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