Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5028 |
Symbol | |
ID | 1186713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5725001 |
End bp | 5726464 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396349 |
Product | hypothetical protein |
Protein accession | NP_794761 |
Protein GI | 28872142 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGCAC TCGACGAACT CGTTTTCGAC AACCGCTTTG CCCGCCTGGG TGATGCGTTT TCCACCCACG TATTGCCCGA GCCTATCGAC GCGCCGCGCT TGGTGGTCGC CAGCGAATCA GCCCTGGCGC TGCTGGATCT GGCCCCTGAG CAGTCTGAAC TGCCGCTGTT CGCAGAAATT TTCAGCGGTC ACAAGCTGTG GGCCGAAGCA GAGCCACGGG CGATGGTTTA TTCCGGCCAT CAGTTCGGCT CCTACAACCC GCGCCTGGGC GACGGGCGTG GGCTGTTGCT GGGCGAGGTT TACAACGACG CCGGCGAGCA TTGGGACTTG CACCTCAAAG GTGCTGGCCG CACGCCCTAT TCGCGGATGG GCGATGGGCG TGCGGTGCTG AGGTCTTCGA TTCGCGAGTT TCTGGCTTCC GAGGCGCTGC ATGCGCTGGG CATCCCCAGC AGTCGCGCCG CGTGTGTGGT CAGTTCCAAC ACGCCAGTAT GGCGGGAGAA ACAGGAATAT GCGGCGATGG TGCTGCGTCT GGCACAGAGC CACGTGCGTT TCGGCAGCCT TGAATACCTG TTCTACACCA AGCAGCCAGA GCACTTGAAG ACGCTGGCCG AGCATGTACT GACAATGCAT TACCCACACT GTCAGGAGCA GCCCGAGCCC TATCTGGCGA TGTTCCGGGA AATCGTCGAG CGCAATGCCG AGCTGATCGC CAAGTGGCAG GCCTATGGTT TCTGCCACGG CGTGATGAAC ACCGACAACA TGTCGATTCT GGGCATTACC TTCGACTTCG GGCCGTTTGC GTTTCTGGAT GATTTCGACG AGCACTTCAT CTGCAACCAC TCCGATCATG AAGGCCGTTA CTCCTTCAGC AATCAGGTGC CCATCGCGCA GTGGAACCTT AGCGCGCTGG GGCAGGCATT GACGCCGTTT GTCAGTGTGG AAGCGTTGCG CGAGACGATT GGCCTGTTTC TGCCGCTGTA CCAGGCGCAC TATCTGGACC TGATGCGTCG TCGGTTGGGC CTGACGGTTG CGCAGGATCA GGACGACAAG CTGGTCAGCC AACTGCTGCA ACTGATGCAG AACAGCGGCG TGGATTACAC CCTGTTCTTC CGCCGTCTGG GCGATCAACC TGCCGCACAA GCGCTGCGCG CGTTACGTGA TGACTTCGTG GACATCAAAG TCTTCGATGA CTGGGCACAG GCCTATCAGG CACGCATCGC GGCTGAGGAA AACGGCACCG AGCAGGCGCG CAAAGAGCGG ATGCACGCGG TCAATCCGCT GTACATCCTG CGCAACTACC TCGCGCAAAA TGCCATCGAA GCGGCCGAAA AAGGCGATTA CGAAGAAGTC CGCCGCCTGC ACCAAGTGCT CTGCACCCCC TTCACCGAAC AACCCGGCAT GGAAGGCTAC GCGCAACGTC CACCGGACTG GGGCAAGCAC CTTGAGATCA GTTGCTCGTC GTGA
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Protein sequence | MKALDELVFD NRFARLGDAF STHVLPEPID APRLVVASES ALALLDLAPE QSELPLFAEI FSGHKLWAEA EPRAMVYSGH QFGSYNPRLG DGRGLLLGEV YNDAGEHWDL HLKGAGRTPY SRMGDGRAVL RSSIREFLAS EALHALGIPS SRAACVVSSN TPVWREKQEY AAMVLRLAQS HVRFGSLEYL FYTKQPEHLK TLAEHVLTMH YPHCQEQPEP YLAMFREIVE RNAELIAKWQ AYGFCHGVMN TDNMSILGIT FDFGPFAFLD DFDEHFICNH SDHEGRYSFS NQVPIAQWNL SALGQALTPF VSVEALRETI GLFLPLYQAH YLDLMRRRLG LTVAQDQDDK LVSQLLQLMQ NSGVDYTLFF RRLGDQPAAQ ALRALRDDFV DIKVFDDWAQ AYQARIAAEE NGTEQARKER MHAVNPLYIL RNYLAQNAIE AAEKGDYEEV RRLHQVLCTP FTEQPGMEGY AQRPPDWGKH LEISCSS
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