| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5004 |
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| Symbol | glnE |
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| ID | 1186689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5683352 |
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| End bp | 5686309 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396325 |
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| Product | glutamate-ammonia-ligase adenylyltransferase |
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| Protein accession | NP_794737 |
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| Protein GI | 28872118 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAC CTTCACTGGC CGATTTTCCG GCTATTTTGC TGCCGTTTAT TACCCGTGCC
CGGCAAACCT GGCGCACCGC CCTGACTGAA TTGTCCGCTG AAGCGCTGGC GTCTTTCGAG
GCCTGGCCCG AGGCACGCCG CACGGCATTT GACCGGGTGT GCGCGGCCAG CGACTTTGTT
ACTGAGCAAA TCTGCCGCGA TCCGCAGATG CTCCTGCAGC TGGCCGGTTC GGGCGAGCTG
GAGCGTAGCT TTTCTGTCGG CGAGTTGCGC GGGCAAATTG CCGATGCGCT GTCGAGCGCC
GTCACCGAGG ACGAGCTGGG GCGTAATCTA CGTCGGCAGC GCGCACGCCA GCAAGTGCGA
ATCATCTGGC GCGATCTGAC CCGTCAGGCA GATTTGATCG AAACCTGCCG CGATCTATCT
GAAATGGCCG ATGCTTCGAT CGACCTTGCC TACCAATGGC TCTATCCGCG CCATTGTCAG
CAGTTCGGTA CGCCGACCGG TCGCCATTGC GGCCTGCCGC AACAGATGGT CATTCTCGGC
ATGGGCAAAC TCGGCGCGGT CGAGCTGAAC CTGTCGTCGG ACATCGACCT GATTTTTGCC
TACCCGGAAG GCGGCGAGAC GGTCGGCACC AAGCGTGCAT TGGACAATCA GGAGTTTTTC
ATTCGCCTGG GCCAGCGGCT GATCAAGGCG CTGGACCCGG TGACGGTTGA CGGCTTTGTG
TTCCGCGTTG ACATGCGCCT GCGGCCCTAC GGTTCATCCG GGGCGCTGGT GCTCAGCTTC
AATGCGCTGG AGCAGTATTA CCAGGATCAG GGCCGCGACT GGGAACGCTA CGCGATGATC
AAGGCGCGGG TGGTCGGCGG TGATCTGGCG GCGGGTGCCG AATTGCTGGA AATGCTGCGC
CCGTTTGTGT ATCGCCGCTA CCTGGATTTC TCGGCCATCG AAGCGCTGCG CACCATGAAG
CAGTTGATTC AGCAGGAAGT GAAACGCAAG GGCATGGCGG AAAACATCAA GCTGGGTGCT
GGCGGAATTC GCGAAGTCGA GTTTATCGCC CAGGCGTTCC AGTTGATCCA CGGTGGCCGC
GACCTGAGCC TGCAACAGCG TCCGCTGTTC AACGTGCTGA AAACCCTCGA AGGGCAGGGC
TATCTGCCTT CGGCGGTGAC CGAAGAGCTG CGCGAAGGCT ACGAATTTCT GCGTTACACC
GAGCACGCCA TTCAGGCGAT TGCCGACCGC CAGACGCAAA TGCTGCCTGA CAACGAGCAG
GATCAGGCGC GCATCGCCCT GATCATGGGC TTTGCCGACT GGGCCAGCTT TCACGAGCGC
CTCATGTACT GGCGCAGCCG GGTGTCCTGG CATTTTCGTC AGGTCATCGC CGATCCCGAT
TCTGATCCGG ACGACGAGCT GCAGGACGAC AGTGAAGTGG TTGTGGGCGG CGAGTGGCTG
CCCTTGTGGG AAGAGTCCCA GGATGAAGAC GCAGCAGGCC GTCAGTTGTT GCAGGCAGGT
TTCGTCGATA CTGGCAAAGC GCTTAAAAGT CTGGCCGACC TGCGCAGCAG TCCGAATCTG
CGCTCGATGC AACGCCTGAG CCGTGAACGT CTGGATGCCT TCATTCCCCG GCTGCTGGCG
CAGGCGGTGG AGCATGAAAA GCCCGATCTG GTGCTGGAAC GGGTGTTGCC GTTGGTGGAG
GCCGTTGCCC GGCGCTCGGC GTATCTGGTG CTGCTCACTG AAAACCCTGA TGCGCTGCGC
CAGTTACTGA CCCTGTGCGC CGCCAGCCCA TGGATCGCCG AACAGATCGC GCGCTTCCCG
CTGCTGCTCG ATGAATTGCT CAATGAAGGT CGTCTGTTCA ATCCGCCGTT GGCACCGGAA
CTGGCGGCTG AGCTGCGTGA GCGGCTGGTG CGTATTCCTG AGGACGACCT CGAGCAGCAA
ATGGAGGCCC TGCGCCACTT CAAGCTGGCG CACAGCCTGC GGGTCGCGGC TTCCGAGATA
TCCGGCAGCC TGCCATTGAT GAAAGTCAGT GATTACCTGA CCTGGCTGGC CGAAGCGATT
CTGGATCAGG TGCTGGCCCT GGCGTGGCGC TACAGCGTGG CCCGTCACGG CACGCCCTCC
CGGCCCGACG GCACATTGTG CGATCCGGGT TTTGTGATTG TCGGTTATGG CAAGGTCGGC
GGCATCGAGC TGGGTCACGG CTCCGATCTG GATCTGGTGT TCATCCATGA TGGCGATCTG
CAGACCGAGA CCGACGGCGC CAAACCTATC GACAGTGCGC AGTTTTTCAC CCGGCTGGGG
CAGCGGGTGA TCCATTTACT CACCACGCAA ACCAACTCCG GTCAGTTGTA TGACGTCGAT
ATGCGCCTGC GCCCCTCCGG TGCATCCGGG CTGCTGGTCA GCTCGCTGGG TGCCTTTGCC
CGCTATCAGG CCAATGAAGC CTGGACCTGG GAGCATCAGG CGCTGGTCCG CGCGCGCGTG
CTGACCGGTA GCCGTGATGT GGGTGAGCAG TTCGAGAAAG TCCGGGCCGA TGTGCTGGGT
CGCGAACGTG ATCTGGACAC CCTGCGTGCC GAAGTCAGCG AGATGCGCGC GAAGATGCGT
GACAACCTCG GCACCCGGCT GACGGCGGCG GGCAGGGCGG CCAATGCCTT CGAGGCGTCG
GTGCCATTCG ACCTCAAGCA GGACGCCGGT GGTATCGTCG ATATCGAATT TATGGTGCAA
TACGCCGCCT TGGCGTGGTC CAGAGAGCAT CCCGCGCTGT TGCAACACAC CGATAACATC
CGGATTCTCG AAGGGCTTGA AGAGGCCGGG CTGTTGCCGG ATGTGGACGC CAGCCTGTTG
CGCGAAGCCT ACAAGGCGTA CCGCTCGGCG GCGCACCGTC AGGCCCTGCA GAAGCAGGCG
GGCGTGGTCG GCGGCGATCA GTTTCATGCC CAGCGGCGTG AGGTGATGCG GATCTGGGCG
CAAATGGGAT TGAGCTGA
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| Protein sequence | MSLPSLADFP AILLPFITRA RQTWRTALTE LSAEALASFE AWPEARRTAF DRVCAASDFV
TEQICRDPQM LLQLAGSGEL ERSFSVGELR GQIADALSSA VTEDELGRNL RRQRARQQVR
IIWRDLTRQA DLIETCRDLS EMADASIDLA YQWLYPRHCQ QFGTPTGRHC GLPQQMVILG
MGKLGAVELN LSSDIDLIFA YPEGGETVGT KRALDNQEFF IRLGQRLIKA LDPVTVDGFV
FRVDMRLRPY GSSGALVLSF NALEQYYQDQ GRDWERYAMI KARVVGGDLA AGAELLEMLR
PFVYRRYLDF SAIEALRTMK QLIQQEVKRK GMAENIKLGA GGIREVEFIA QAFQLIHGGR
DLSLQQRPLF NVLKTLEGQG YLPSAVTEEL REGYEFLRYT EHAIQAIADR QTQMLPDNEQ
DQARIALIMG FADWASFHER LMYWRSRVSW HFRQVIADPD SDPDDELQDD SEVVVGGEWL
PLWEESQDED AAGRQLLQAG FVDTGKALKS LADLRSSPNL RSMQRLSRER LDAFIPRLLA
QAVEHEKPDL VLERVLPLVE AVARRSAYLV LLTENPDALR QLLTLCAASP WIAEQIARFP
LLLDELLNEG RLFNPPLAPE LAAELRERLV RIPEDDLEQQ MEALRHFKLA HSLRVAASEI
SGSLPLMKVS DYLTWLAEAI LDQVLALAWR YSVARHGTPS RPDGTLCDPG FVIVGYGKVG
GIELGHGSDL DLVFIHDGDL QTETDGAKPI DSAQFFTRLG QRVIHLLTTQ TNSGQLYDVD
MRLRPSGASG LLVSSLGAFA RYQANEAWTW EHQALVRARV LTGSRDVGEQ FEKVRADVLG
RERDLDTLRA EVSEMRAKMR DNLGTRLTAA GRAANAFEAS VPFDLKQDAG GIVDIEFMVQ
YAALAWSREH PALLQHTDNI RILEGLEEAG LLPDVDASLL REAYKAYRSA AHRQALQKQA
GVVGGDQFHA QRREVMRIWA QMGLS
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