| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4991 |
|---|
| Symbol | |
|---|
| ID | 1186676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5664844 |
|---|
| End bp | 5665974 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637396312 |
|---|
| Product | glycosyl transferase, group 1 family protein |
|---|
| Protein accession | NP_794724 |
|---|
| Protein GI | 28872105 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCT CGGCTGATCG TCACGTGCTG CAGTTCTGCC ACGGCTATGA CGGGCCGTTT
CTTGACTGCG CACGGCAATA CGCCAGCCTG TTTGTCGGCA AGGGCTATCG GGTGACGACG
GTGTTTCTGA CCGGCGCCGC CGACCCCGAT GTGGTCGCCG ACTGCGGTTC GGACGAAGTG
CTGTTCATGG AGTACAGCTC CAGTGCCATT CGCGGCCTGA AGCTGGGCGC TATCCGGGAC
CTGTGCAAAA TCGCCGCCAC GCGCAGTTTC AGCTTCTGCA TCGCCCACCG TTTCAAACCG
GTGTACATCG CCCTGCTGGC GACCAGCCTG CCGGTGATCG GCGTGCACCA TGCGTTCGGC
GACTACAAAC GCCGTACGCG CAAACTGTTT GCTACGCTGT TTCGCAAGCG CCTGAGCCTG
CTCGGCGTGT CCGATGCGGT GCGCGATGAC ATGCGCAGCA GCCTGCCCAA GTGGCCGGCC
GAGCGCATTC AGACCCTGTA CAACCGCATT GATGTCGAGC AACTGCAGGG CAGTCAGTTT
TCCGCTGAAG ATGCCCGCAC AGAGCTTGGC CTGTCGCCGT CGGCGTGGAT TGTCGGCAAC
GTCGGTCGTC TGCATCCCGA CAAGGATCAG GCCACGCTGT TACGCGGTTT TGCCGAGGCG
TTGCCCAGCC TTCCCGAGAA CAGCCAGTTG GTGCTTCTCG GCAAGGGTCG CCTGGATGAA
ACCCTCAAGT CGCTCGCGCT GGAACTGGGC ATAGGCCCGC ATGTGCTGTT TCTCGGGCAG
GTGCCTGACG CCCGCCGTTA CTTCAAGGCG TTCGACGTGT TCGCCTTGAG CTCGGATCAC
GAGCCGTTCG GCATGGTGCT GCTGGAAGCG ATGGTGGCCG GTGTGCCGCT GGTTGCGACC
TCGTGCGGCG GCGCGAAGGA AGTGGTGGAA GATGTCGGCC TGCTGTTCCC GCTGGGCGAT
GCCCACAGCC TGGCGCATGG GCTGGTGCAC ATGGCCGGGC TTGACGTCGA GCAGCGTCAG
GACTGCGCCG AGCGCATGCT GCTGCGCCTG CGCGAGCGTT TTTCCGATCA TGCGGTACGC
GATGTCTTCT GGCGCTTGCC GCAAGTCTCC AGCCTGACAG CGGGGGCCTG A
|
|---|
| Protein sequence | MTRSADRHVL QFCHGYDGPF LDCARQYASL FVGKGYRVTT VFLTGAADPD VVADCGSDEV
LFMEYSSSAI RGLKLGAIRD LCKIAATRSF SFCIAHRFKP VYIALLATSL PVIGVHHAFG
DYKRRTRKLF ATLFRKRLSL LGVSDAVRDD MRSSLPKWPA ERIQTLYNRI DVEQLQGSQF
SAEDARTELG LSPSAWIVGN VGRLHPDKDQ ATLLRGFAEA LPSLPENSQL VLLGKGRLDE
TLKSLALELG IGPHVLFLGQ VPDARRYFKA FDVFALSSDH EPFGMVLLEA MVAGVPLVAT
SCGGAKEVVE DVGLLFPLGD AHSLAHGLVH MAGLDVEQRQ DCAERMLLRL RERFSDHAVR
DVFWRLPQVS SLTAGA
|
|---|
| |