Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4921 |
Symbol | pncB |
ID | 1186604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5570362 |
End bp | 5571585 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396240 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | NP_794654 |
Protein GI | 28872035 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA GCGCCTTTTC AAATCGCATC GTGCAAAGCC TGCTCGATAC CGATTTCTAC AAATTGACCA TGATGCAGGC GGTGCTGCAC AACTACCCCA ACGTCGACGT TGAATGGGAG TTCCGCTGCC GCAACGGTGA AGACCTGCGT CCCTACCTGG GCGAAATCCA GCACCAGATC GAGCTGCTGT GCGAGCTGTC CCTGAGCCCT GAACATCTGG TCTTTCTGGA ACGCATCACC TTCATGAAAC CGGATTTTCT GAGGTTTCTG GGCCTGTTCC GTTTCAATAC CCGCTACGTA AAAACCAGCA TCGAGAACGA TGAACTGTGC ATTCGCCTGC ACGGCCCGTG GCTCCACGTC ATCCTCTTTG AAGTGCCGTT GCTGGCGATC GTCAGCGAGG TGCGCAATCG GCATCGCTAC CCGGACACCC TGCTCAGCCA GGCGCGGGAT CGCCTGTACG ACAAGTTCGA ATGGCTGACC GTCAACGCCA CGCCAGATGA ACTGGCCGAG CTGAAAGTCG CAGACTTCGG CACGCGCAGG CGGTTCTCCT ACCGTGTGCA GGAAGAAGTT CTCAACGTGC TCAAGCTGGA CTTTCCGGGG CAACTGGTCG GCACCAGCAA CGTTCACCTG GCGCGCCAGC TTGACCTCAA ACCGCTCGGC ACGATGGCCC ACGAATGGAT CATGGCTCAC CAGCAACTGG GGCCGCGCCT GATCGACAGT CAGATCGCCG CGCTTGATTG CTGGGTTCGC GAGTACCGCG GTCTGTTGGG TATTGCGCTG ACTGACTGCA TCACCACCGA TGCCTTCCTG AACGACTTCG ATCTGTACTT CGCCAAGCTG TTCGACGGTT TACGCCATGA TTCGGGCGAC CCGGTGAAGT GGGCCGAAAA ATGCATCTCG CACTACCAGA AACTGGGTAT CGACCCGATG AGCAAGACGC TGGTGTTCTC CGATGGGCTG AACCTGCCCA AGGCACTCGA TATTTTTCGG GCGTTACGCG GACGCATCAA TGTCAGCTTC GGCATCGGCA CCAACCTGAC CGCCGACATA CCCGGCATCG CCCCCATGAA CATGGTGTTG AAGATGACCG CTTGCGCAGG TCAGGCGGTG GCAAAAATTT CCGATGAGTC CGGCAAGACG CAATGCAAGG ACCCGAACTT TGTCGCCTAC CTGCGGCATG TGTTCAAGGT GCCTGATTTG CCGAGCCCCG CAAAACCCGC TTGA
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Protein sequence | MSESAFSNRI VQSLLDTDFY KLTMMQAVLH NYPNVDVEWE FRCRNGEDLR PYLGEIQHQI ELLCELSLSP EHLVFLERIT FMKPDFLRFL GLFRFNTRYV KTSIENDELC IRLHGPWLHV ILFEVPLLAI VSEVRNRHRY PDTLLSQARD RLYDKFEWLT VNATPDELAE LKVADFGTRR RFSYRVQEEV LNVLKLDFPG QLVGTSNVHL ARQLDLKPLG TMAHEWIMAH QQLGPRLIDS QIAALDCWVR EYRGLLGIAL TDCITTDAFL NDFDLYFAKL FDGLRHDSGD PVKWAEKCIS HYQKLGIDPM SKTLVFSDGL NLPKALDIFR ALRGRINVSF GIGTNLTADI PGIAPMNMVL KMTACAGQAV AKISDESGKT QCKDPNFVAY LRHVFKVPDL PSPAKPA
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