Gene PSPTO_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4908 
Symbol 
ID1186591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5557588 
End bp5558220 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID637396227 
Producttranscriptional regulator, TetR family 
Protein accessionNP_794641 
Protein GI28872022 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCCC GCGCCGAACA GAAACAACAG ACCCGACGAG CCTTGCTGGA TGCCGCCCAC 
CAGTTGATGG AGAGTGGCCG CGGGTTCGGC AGCCTCAGCC TGCGTGAAGT GGCGCGCACG 
GCAGGCATCG TACCGACCGG TTTCTATCGC CATTTCGAGG ACATGGATCA GTTGGGTCTG 
GCGCTGGTCA TCGAGGTTGG CCAGACTTTT CGCGAGACCA TCCGCCTGGT GCGCCATAAC 
GAATTCGCCA TGGGCGGCCT GATTCGCGCC TCGGTGAAAA TATTTCTCGA ACGTGTGGCG 
GCCAACCGTT CGCAGTTTCT GTTTCTGGCC CGCGAACAAT ACGGCGGCTC GCTCAAGGTG 
CGTCAGGCGC TCGGCGCGCT GCGCGAAGGC ATCAGCGCTG ACCTGACCGC CGACCTGGCG 
AAGATGCCCA AGTGGCAACA CCTGAATGCC GACGCGCTGT CGATAATCGC TGACCTGGTG 
GTGAAAAGCG TCTTCGCCAT GCTTCCCGAA CTGATCGATC CGCCACCCGC CTCGCTGGCA 
CCGCACTTGA CGCCACAAGC GAAGATCACC CAGCAGTTGC GCTTCATTTT TATAGGCGCA 
CGACATTGGC GGGGGCTTGG CACTCACGAT TGA
 
Protein sequence
MLPRAEQKQQ TRRALLDAAH QLMESGRGFG SLSLREVART AGIVPTGFYR HFEDMDQLGL 
ALVIEVGQTF RETIRLVRHN EFAMGGLIRA SVKIFLERVA ANRSQFLFLA REQYGGSLKV 
RQALGALREG ISADLTADLA KMPKWQHLNA DALSIIADLV VKSVFAMLPE LIDPPPASLA 
PHLTPQAKIT QQLRFIFIGA RHWRGLGTHD