Gene PSPTO_4860 details

Gene Information

• Locus tag: PSPTO_4860
• Symbol: accB
• ID: 1186543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5505070
• End bp: 5505525
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637396180
• Product: acetyl-CoA carboxylase, biotin carboxyl carrier protein
• Protein accession: NP_794594
• Protein GI: 28871975
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein
• TIGRFAM ID: [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.985135
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATTC GCAAAGTCAA GAAGCTGATC GAATTGCTGG AAGAGTCCGG CATCGACGAG 
CTGGAAATTC GTGAAGGCGA AGAATCCGTA CGGATCAGCC GTCACAGCAA GACCCCGGCG 
CAGCCTTACT ACGCGCCCGC TCCGGTTGCA GCGCCGGTCG CCGCACCAGC CCCTGCCGCC 
GCCCCGGCCG CTGCAGAAGC ACCCTCGGCA CCGAAACTGA ACGGTTTTGT GGTCAAGTCG 
CCAATGGTCG GTACGTTCTA CCGCACTCCG GCACCTACTT CGCCTGCATT CGTCGAAGTC 
GGCCAGACCG TCAAGAAAGG CGACACCATC TGCATCGTCG AAGCGATGAA AATGATGAAC 
CACATCCAGG CAGAAGCCAG CGGTGTGATC GAATCCATCC TGGTAGAAAA CGGTCAGCCG 
GTTGAGTTTG ACCAGCCGCT GTTCACTATC GTTTGA 

 

Protein sequence

MDIRKVKKLI ELLEESGIDE LEIREGEESV RISRHSKTPA QPYYAPAPVA APVAAPAPAA 
APAAAEAPSA PKLNGFVVKS PMVGTFYRTP APTSPAFVEV GQTVKKGDTI CIVEAMKMMN 
HIQAEASGVI ESILVENGQP VEFDQPLFTI V