| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4854 |
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| Symbol | |
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| ID | 1186537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5499680 |
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| End bp | 5500567 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396174 |
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| Product | hypothetical protein |
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| Protein accession | NP_794588 |
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| Protein GI | 28871969 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCAT CCGTGGTGCT TGGCCTGATT TCAGTCGTGT TGCTGATGGC GTCCGTTCGC
ATGTTCTATC TGGCGCTCAA TCAGGGTGCC AGCGAGCGGG TCAGGCAGCG CCTGACTGCC
GGGCACGTGC AGCCGGCGGC GGCCGAAAAG GCCGGATGGT CGTACCTGGA CCGGGCCTTT
CTGCGCGCCG GGCTGGGCAA GGCGACCGAA CGCACAGGCC TGGCGTTGAC GCTCTATGCG
CTATTGATCG TGCTGGGTTA CTGGCTGGGC GGCGGGCTCG GCGCGGTCAG CATGCTGCTG
GCCGTCCCAT TGGTCGTGCG GGTATTTGTT TCATGGCGCT ATGAAAGGCG CGTTCGCCGC
ATGATCCAGC AATTGCCGCA ATTGCTCGAT CACACCGTGC GCAGCCTCAA GTCCGGCAGA
ACCCTGGCCG ATGCGGTGCT GCACGGTATC GAGGCGACGG ACCAGCCACT CAAGGACGGC
ATGAGCCGCA TCGAACTCAA TGTGCAACTG GGCGTCAGCC TGCCGGATGC CGTCAGGGAT
TTTGCCGAGT TGTACGAGCG CGACGAGTTT CACCTGTTTG CCCTGGGCCT GCGGGTCAAC
CATCGATATG GCGGCAACGC CAGCGAACTG ATGGAGAACC TGATCAAGCT GATTCGTGAC
AGAGAGCAGG CCGGTCGCCA ATTGCGCGCC ATGACCGGTG AAACCCGCAT GACGGCTATC
GTCCTGGGGC TACTGCCGGT GAGCATGGCC GGCTACTTCC TGGCGGTGAA CCCCGATTAC
CTGCTGCAAA TGTGGAGCGA TGACAGCGGG CGAATCATGT TGAGCATGGC GTTTGGCCTG
CAAATGCTGG GCTGCCTGAT GCTGTGGCGC ATGCTGAGGA GCATCTGA
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| Protein sequence | MHASVVLGLI SVVLLMASVR MFYLALNQGA SERVRQRLTA GHVQPAAAEK AGWSYLDRAF
LRAGLGKATE RTGLALTLYA LLIVLGYWLG GGLGAVSMLL AVPLVVRVFV SWRYERRVRR
MIQQLPQLLD HTVRSLKSGR TLADAVLHGI EATDQPLKDG MSRIELNVQL GVSLPDAVRD
FAELYERDEF HLFALGLRVN HRYGGNASEL MENLIKLIRD REQAGRQLRA MTGETRMTAI
VLGLLPVSMA GYFLAVNPDY LLQMWSDDSG RIMLSMAFGL QMLGCLMLWR MLRSI
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