| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4814 |
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| Symbol | holA |
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| ID | 1186497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5453217 |
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| End bp | 5454254 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396134 |
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| Product | DNA polymerase III, delta subunit |
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| Protein accession | NP_794548 |
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| Protein GI | 28871929 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.664461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG CCCCCGCCCA ACTGGCTAAA CACCTGCAAG GTACGCTCGC GCCTGTCTAT
GTGATCAGTG GCGACGACCC GCTGCTTTGT CAGGAGGCTG CCGATGCCGT CCGCGCCGCT
GCACGCCAGC AGGGCTTCGA TGAACGTCAG GTGTTCAGCG CAGACGCCAG CTTCGACTGG
GGCACGTTGC TCCAGGCCGG TGCCAGCATG TCGCTGTTCG CCGAACGCCG TCTTCTGGAA
CTGCGCCTGC CTTCGGGCAA GCCCGGTGAC AAAGGTGCAG CCGCGCTCAT GGAATACTGC
GCCAGACCTG CCGAAGACAC CCTGCTGCTG ATCAGCCTGC CCAAACTGGA TGGCAGTGCG
CAGAAGACCA AATGGGGCAA GGCACTGGTT GAAGGTGCGC ACACCCAGTT CGTGCAGATC
TGGCCGGTGG ACATCGGCCA GTTGCCACAA TGGATTCGCC AACGTTTGTC GCAGGCGGGG
CTTTCGGCCA CACAGGATGC TGTCGAACTG ATCGCAGCGC GGGTTGAAGG TAACCTGCTG
GCCGCTGCGC AGGAAATCGA AAAGCTCAAG CTAATGGCCG AAGAAGGCCA GATCACTGTT
CAGACCGTAC AGGCTGCGGT GGCCGACAGT GCGCGTTTCG ATGTATTCGG CCTGACCGAC
GCAGTGCTCA ACGGCGAGGC GGCACATGCC CTGCGCATGC TTGAGGGCCT GCGCGGCGAG
GGGGTCGAGA CGCCGGTGAT TCTCTGGGCG TTGACTCGCG AACTGCGTGC GCTGGCCAAC
ATGTCCCAAC AGTTCAGCCA GGGTGTGCCG CTCGACAAGG TGTTCAGCTC GGCCCGCCCA
CCGGTCTGGG ACAAGCGCAA ACCGCTGATG AGCAAAGCCC TGCAACGCCA CTCGGCAAAA
CGCTGGAGCC AGTTGCTGAT GGACGCGCAG CGCATCGACG CGCAAATCAA GGGCCAGGCG
GCAGGCTCGC CTTGGAGCAG CCTGAGCCGA CTGGCGCTAC TGATGGCGGG ACAGAGGCTG
GCGCTGCCAG CGGAGTGA
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| Protein sequence | MKLAPAQLAK HLQGTLAPVY VISGDDPLLC QEAADAVRAA ARQQGFDERQ VFSADASFDW
GTLLQAGASM SLFAERRLLE LRLPSGKPGD KGAAALMEYC ARPAEDTLLL ISLPKLDGSA
QKTKWGKALV EGAHTQFVQI WPVDIGQLPQ WIRQRLSQAG LSATQDAVEL IAARVEGNLL
AAAQEIEKLK LMAEEGQITV QTVQAAVADS ARFDVFGLTD AVLNGEAAHA LRMLEGLRGE
GVETPVILWA LTRELRALAN MSQQFSQGVP LDKVFSSARP PVWDKRKPLM SKALQRHSAK
RWSQLLMDAQ RIDAQIKGQA AGSPWSSLSR LALLMAGQRL ALPAE
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