Gene PSPTO_4808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4808 
SymbolcutE 
ID1186491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5446799 
End bp5448319 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content63% 
IMG OID637396128 
Productapolipoprotein N-acyltransferase 
Protein accessionNP_794542 
Protein GI28871923 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGGA TAACCCGCCC CGGCTGGCCC GGTAACCTGC TGGCCCTGGC GGCTGGCGGG 
CTCACGACCC TGGCCCTGGC GCCTTTCGAC TTCTGGCCGT TGGTGCTGGT ATCGGTGGCG
ATGTTCTATC TGGGGCTGCG CGAGTTGAGT CCGCGTCAGG CACTGGCTCG CGGCTGGTGT
TACGGCTTCG GTCTGTACGG CGCAGGCACC AGTTGGATCT ACGTCAGCAT CCACACCTAC
GGCGGTGCTT CCGCGCTGCT GGCAGGTTTG CTGATGCTGC TGTTCATCGC AGCCATCGCG
CTGTTCTTTG CCCTGCCCGC CTGGGTCTGG GCGCGCTGGC TGAGACGCAA CGAAGCGCCA
CTGGCAGATT CGCTGGCGTT TGCCGCCCTG TGGCTGTGGC AAGAGGCGTT TCGCGGCTGG
TTTCTTACCG GCTTTCCGTG GCTCTATTCC GGTTACAGCC AGCTCGACGC CCCGCTTGCC
GGCCTCGCGC CGGTTGGCGG CGTCTGGCTG ATTTCATTTG CGCTGGGCCT GACCGCTGCA
CTGTTGTGCA ACCTGCACCG CTTGCGGGCA CGCAAATCGT TTCTGGCCAT GGGCGTGCTG
CTGTTGCTGG CACCGTGGGT CGCAGGTCTG GCGCTCAAGG ATCACGCCTG GACCTCGCCT
TCCGGCCCGC CGCTGAAAGT GGCGGCCATG CAGGGCAACA TCGAACAAAG CATGAAATGG
GACCCGCAAA AGCTCAACGA TCAACTGGCG CTGTATCGGG ACATGACCTT TCGCTCACAG
CAGGCCGACC TGATTGTCTG GCCGGAAACG GCTGTGCCGG TCCTCAAGGA AAGCGCAGAA
GGCTACCTGT CGATGATGGG CAAGTTTGCT GCGGACCGTG GCGCGGCGCT GATCACGGGC
GTGCCGGTGC GTGAGCCGAC CGGGCGTGGC GAATACAGCT ATTACAACGG CATCACCGTC
ACCGGCCAGG GCGACGGCAC TTATTTCAAG CAGAAGCTCG TTCCGTTCGG TGAATACGTG
CCGTTGCAGG ACCTGTTGCG CGGGCTGATC TCCTTCTTCG ACCTGCCGAT GTCCGACTTC
GCACGCGGCC CGAACGATCA GGCTCTATTG CAGGCCAAGG GTTATCACAT CGCGCCGTTC
ATCTGCTATG AAGTGGTTTA TCCGGAGTTC GCCGCAGGCC TGTCGGCGCA GAGCGATCTG
CTGTTGACGG TCAGCAATGA CACCTGGTTC GGCACCTCGA TCGGTCCTCT GCAACATTTG
CAGATGGCCC AGATGCGCGC CCTTGAAGCG GGACGCTGGA TGATCCGCGC GACCAACAAT
GGTGTTACTG CGCTGATCGA CCCGTTCGGC AGGATCACCG TGCAGATTCC GCAGTTCGAG
CGTGGCGTGC TGTACGGCGA GGTGGTGCCG ATGCACGAAC TCACGCCGTA TCTGCACTGG
CGCTCGTGGC CACTGGCGAT TGTCTGCCTG CTGTTATTTG GCTGGGCGTT GCTGGCGGCC
CGGATCTCCA AGACTGTCTG A
 
Protein sequence
MRWITRPGWP GNLLALAAGG LTTLALAPFD FWPLVLVSVA MFYLGLRELS PRQALARGWC 
YGFGLYGAGT SWIYVSIHTY GGASALLAGL LMLLFIAAIA LFFALPAWVW ARWLRRNEAP
LADSLAFAAL WLWQEAFRGW FLTGFPWLYS GYSQLDAPLA GLAPVGGVWL ISFALGLTAA
LLCNLHRLRA RKSFLAMGVL LLLAPWVAGL ALKDHAWTSP SGPPLKVAAM QGNIEQSMKW
DPQKLNDQLA LYRDMTFRSQ QADLIVWPET AVPVLKESAE GYLSMMGKFA ADRGAALITG
VPVREPTGRG EYSYYNGITV TGQGDGTYFK QKLVPFGEYV PLQDLLRGLI SFFDLPMSDF
ARGPNDQALL QAKGYHIAPF ICYEVVYPEF AAGLSAQSDL LLTVSNDTWF GTSIGPLQHL
QMAQMRALEA GRWMIRATNN GVTALIDPFG RITVQIPQFE RGVLYGEVVP MHELTPYLHW
RSWPLAIVCL LLFGWALLAA RISKTV