Gene PSPTO_4806 details

Gene Information

• Locus tag: PSPTO_4806
• ID: 1186489
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5445409
• End bp: 5445909
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637396126
• Product: hypothetical protein
• Protein accession: NP_794540
• Protein GI: 28871921
• COG category: [R] General function prediction only
• COG ID: [COG0319] Predicted metal-dependent hydrolase
• TIGRFAM ID: [TIGR00043] metalloprotein, YbeY/UPF0054 family

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAGC TGGACCTGCA GATTGCGAGT GAAACGCCCG CCCCCGATGA AGCCCGATTT 
CGCCTCTGGT GTGAAATGGG CCTGCGCCAG CGCAGTGCCG ATTCCGAGCT GACCATCCGG 
CTGGTTGACG AAACCGAAGG CCGTGAGCTC AATCACACCT GGCGACATAA AAATTACGCT 
ACAAACGTGC TTTCATTCCC GGCGGATGTT CCAGACGACA TGCTGGACAT CCCGTTGCTG 
GGCGACCTGG TCATCTGCGT CCCGGTGGTC AACCGCGAAG CCGCTGAACA AGGCAAGTCC 
ATCGACGCGC ACTGGGCACA CATGGTCATT CATGGCTGCC TTCATCTGTT GGGTTACGAC 
CACATCGATG ATGAAGAAGC CGAAGAAATG GAAGCACTGG AACGAACGTT GCTTGAGGAG 
TTGGGCTACC CCGATCCTTA CGCCGACGAC GAAAGTGCCG ACCACCCCCA TTCAGACACA 
CCCAGCAAGG ACCACGAGTA A 

 

Protein sequence

MLELDLQIAS ETPAPDEARF RLWCEMGLRQ RSADSELTIR LVDETEGREL NHTWRHKNYA 
TNVLSFPADV PDDMLDIPLL GDLVICVPVV NREAAEQGKS IDAHWAHMVI HGCLHLLGYD 
HIDDEEAEEM EALERTLLEE LGYPDPYADD ESADHPHSDT PSKDHE