Gene PSPTO_4799 details

Gene Information

• Locus tag: PSPTO_4799
• Symbol: thiE
• ID: 1186482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5439438
• End bp: 5440055
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637396119
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: NP_794533
• Protein GI: 28871914
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTAC GTGGCCTGTA TGCCATCACC GACAGCCAGT TGCTGACCGG CAAATTTCTG 
TCTTATGTCG AGGCTGCGCT GGACGGCGGC GTGACGCTGC TGCAATACCG CGACAAAACC 
GGTGACGACT CCCGCCGTCT GCGCGAAGCG ACCGAACTGC TCAAACTTTG CGAACGCTAC 
AAGACGCGGC TGATTATCAA CGACGACGCC GAGCTGGCGG CTCGTCTGGG GGTTGGTGTG 
CATTTGGGGC AGACCGACGG TTCTTTGCCG GATGCCCGCG CCCTGCTGGG GCACAAGGCG 
ATCGTCGGTG CTACGTGCCA CGGCCAGCTT GAGCTGGCGG AACAAGCCAA GGCTGACGGC 
GCGACCTACG TGGCGTTTGG CAGGTTCTTC AATTCGCAGA CCAAGCCCGG CGCACCGGCC 
GTGCCGCTGG ACCTGATCGC CCAGGTCCGC GCCAGGGTTC ATTTGCCGAT TGCGGTGATC 
GGCGGCATCA CCCTGGAAAA CGCCCCGCAA CTGGTCGAGC ACGGCGCTGA CCTGCTGGCC 
GTGGTGCATG GCCTGTTCGG CGCCGAAACC CCACAGGAAG TCACCCGTCG GGCGAAAGCG 
TTTATGGCGT TGTTGTAG 

 

Protein sequence

MKLRGLYAIT DSQLLTGKFL SYVEAALDGG VTLLQYRDKT GDDSRRLREA TELLKLCERY 
KTRLIINDDA ELAARLGVGV HLGQTDGSLP DARALLGHKA IVGATCHGQL ELAEQAKADG 
ATYVAFGRFF NSQTKPGAPA VPLDLIAQVR ARVHLPIAVI GGITLENAPQ LVEHGADLLA 
VVHGLFGAET PQEVTRRAKA FMALL