| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4786 |
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| Symbol | |
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| ID | 1186469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5425668 |
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| End bp | 5426981 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637396107 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_794521 |
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| Protein GI | 28871902 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.572193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATA ATGATGTAAA AAGAAAGCTG CGTGAGCACA CGGCAGAACT GCACGTGTTG
CATCAACTGC TTGGCAGGAT TGATCAAGAC ATGCTGACGG TTCAAGTGGA CGGCAACTTC
ACGATTTCTG CCGCTAATCA AGGTTTTGCT AAAGCCTTGG GATATACGCC AGATCGCTTG
TCGGGTTTTC CGCTATCCAG CATCGCTGCG TTTGACTCGA AAGGCATGCC ATGGTTTCAC
GGCCTGAAAA CAACGCTGCT CCGCTTTGAA TCGATGACAA ATGAATATCA CTTCATCCGT
GCAGACAACA CCATCGCATG CTTGAAACTA TTCTGGTTCC CGGTACAGGC CGAAAACGGC
GGTTTGTCTC ACATTCAATG CTATGGCCAT GACGTCACCA AAAGTGCTGA GAGCGCTGCT
GAAAACGAGG CATTGATTGA CGCGCTTTTC AGATCGACGG CGGTGATCCA GTTTAATCTC
GACGGCACGG TCATCACCGC CAATCAGCAG TTTTTACAGG CGATGGGCTA CACCCTCGCG
CAAGTGGCAA ATCGTAGCCA CCGGATGTTC TGTCATGCCG GCGATGCTGA GTCCCCCCAG
TACACAGCGT TCTGGAAGAA GCTTAACCAA GGTGAATATG TCGAGGGGCG CTTCAGGCGG
ATGGACAGCC GAGGCAAGGA AATCTGGCTG CAAGCCACTT ACAACCCCGT GCATGACAGC
GCTGGTCGTC TTTACAAAGT CGTAAAGTTT GCCAGCGTGG TCACTCGTCA GGTGGCCAGA
GAAACTGAAG TCAGAGAAGC AGCGGTGGTG GCCTACAACA TTTCGCGACA AACCGATGTC
AGCGCTGAAC GCGGAGCGTC TGTGGTCCAG CAAACGGTGC ACACCATGGA CAATATTGCT
CAACAAGTGC AATCAGCCAC TAAAAGTATT GGCGCGCTCG GCAAACAATC TCTGTTGATC
AGCTCAATCG TGCAGACCAT CAGCAGCATA GCGTCACAAA CCAATCTTTT AGCGCTCAAT
GCTGCCATCG AGGCGGCACG TGCTGGCGAG CATGGACTCG GCTTCGCGGT CGTGGCCGAC
GAAGTCCGGC AGCTTGCCAG TCACACCAGC AGCGCGACGG AGGAGATCGT CAACGTTGTG
CTTCAAAACC GAAGACTGGC TGACCAGGCC ACCGAAGAGA TGACCAACAG TCAGGAACAG
GTCGAACGAG GTTTTGCACT TGCCAGCCAG GCGGGTGAGG AAATTATCGA AATACAGAAA
GGTGCCAAGG AAGTTGTAAA CGCAGTAAGA AGGTTTGTTG AGGAGATTAC GTAG
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| Protein sequence | MFNNDVKRKL REHTAELHVL HQLLGRIDQD MLTVQVDGNF TISAANQGFA KALGYTPDRL
SGFPLSSIAA FDSKGMPWFH GLKTTLLRFE SMTNEYHFIR ADNTIACLKL FWFPVQAENG
GLSHIQCYGH DVTKSAESAA ENEALIDALF RSTAVIQFNL DGTVITANQQ FLQAMGYTLA
QVANRSHRMF CHAGDAESPQ YTAFWKKLNQ GEYVEGRFRR MDSRGKEIWL QATYNPVHDS
AGRLYKVVKF ASVVTRQVAR ETEVREAAVV AYNISRQTDV SAERGASVVQ QTVHTMDNIA
QQVQSATKSI GALGKQSLLI SSIVQTISSI ASQTNLLALN AAIEAARAGE HGLGFAVVAD
EVRQLASHTS SATEEIVNVV LQNRRLADQA TEEMTNSQEQ VERGFALASQ AGEEIIEIQK
GAKEVVNAVR RFVEEIT
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