| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4744 |
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| Symbol | |
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| ID | 1186427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5372875 |
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| End bp | 5374362 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637396066 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | NP_794480 |
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| Protein GI | 28871861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.13628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGCTT ACGAAAACAC AGATCATGAA GGGCGTTTAG TTCTCATCCC CCAAGTAATC
GATGCTTTTG CTGATCTTTG CTTTGGCGAT ACACCTGAGG GTTCAATCCC TGTAACCATT
TTTGGTGTTG GCAGGCAAAT AAACGGCTTT CAGGTAAACG AGGCAATTGG CGATACTGCA
GATAGAGCCA TCTTCAACAT GCCTTTTTTA TTTCATCGCA ATGGAGAACC TTGGAAAGAA
GCAAATTCTT TTCTTCTCAG TCTTGTAAAA AACAAACATG TAAGCAGTCG TCCAGCAGAC
GAAGCAAGAC GAAAGGCTAG TCGGTTACTC GACTATTTAA TATTTACTGA GAATAATAAT
ATCCATTGGA TGGACTTCTC CGGGCGACGA ATAGTTCATA GACCGACGTA TAAGTATCAT
CTGTATTTAT TCCAGCTCCT AGAGCGTGGG CCTGCTGTGG CCAATCAGTA TACTAGTGTT
GTTTATCAGT TTTATAAATT TGTTTCAATG CATTGGCACC CTATTGATAT TGCCAGGGTT
GATTCGGTTC GCGAGATAAA GGTAGCTATA GAAAATAAAT ATGGGTTCAC CCGGCAAATC
ACCGTAGAGA AAAGAAGTCA AACGCAGAAG ACTAACAAAG GTAAGGTGGT GCCGATTGGG
TTGGTGGACG ACGAAGGTGA ATGCCTAAGG CCATTGACGA ATCCGGAACT TTCAGATTTG
CTATCCCTTT TCGATTCGGG GGGGTGGGAT GCGCAAGAGC GTCTCATTAT CCTGTTGCCC
TTGCTGACCG GGTCACGAAA ACAAACTGTT CTAACGCTTC GAGTAAAACA CGTTGAGGCG
TTGATGCAGG GCTTGCGTAC CCCTAAGGGT ACGTACCTGT TGAAGGCTGG GCCTAGGACA
GGGATTGATA CTAAAGGCAA CAAGCCTCAG ACCCTACATG TCCCGGAGCA ACTAGCCGAA
GACTTGCTAA CATATGTTAG AAGCGCCTAT GCAAAAAACC GCAGGAAACG CTTTCAGTTG
AACTATGCAA CAGATTATCC TCATCTTAAA AGTATTCCAG ACGAAGACAT GTACGTGTTT
TTGTCGGAGC AGGCTAACTG TTATTATATG GCTTCAAATG ACCCGCGTTT TCCATTCATT
AAGACTAGGC CGCTAGGTGC CGTAGCCGAT ACTCTTAAGA AGAAAATAAA ACGCTCTGTG
TCGTCCAGTT TTCCCCGAGG TTTTACTTAC CACTGGCTTC GCGCAACGTT TGCTTATCAA
CTTTATCAGC ACTTGATTCC TCTCTTGAAG GATGGGCATC TGCTGTCTGG AGAGGATATC
TCCATCATTC AGTCACGCAT GCATCATGAG CGCCGCGAGA CCACTGAAAA CTACTTAAAG
CTCTTCAAAA TGACGCCTGA TAAGATTCGC GCCCAGGAAG ATTATGAGGG TGTACTATTC
AAAATGTCGT CCTATAGCGA TTTGATTTTG GTTGATGATA ATGCTTGA
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| Protein sequence | MAAYENTDHE GRLVLIPQVI DAFADLCFGD TPEGSIPVTI FGVGRQINGF QVNEAIGDTA
DRAIFNMPFL FHRNGEPWKE ANSFLLSLVK NKHVSSRPAD EARRKASRLL DYLIFTENNN
IHWMDFSGRR IVHRPTYKYH LYLFQLLERG PAVANQYTSV VYQFYKFVSM HWHPIDIARV
DSVREIKVAI ENKYGFTRQI TVEKRSQTQK TNKGKVVPIG LVDDEGECLR PLTNPELSDL
LSLFDSGGWD AQERLIILLP LLTGSRKQTV LTLRVKHVEA LMQGLRTPKG TYLLKAGPRT
GIDTKGNKPQ TLHVPEQLAE DLLTYVRSAY AKNRRKRFQL NYATDYPHLK SIPDEDMYVF
LSEQANCYYM ASNDPRFPFI KTRPLGAVAD TLKKKIKRSV SSSFPRGFTY HWLRATFAYQ
LYQHLIPLLK DGHLLSGEDI SIIQSRMHHE RRETTENYLK LFKMTPDKIR AQEDYEGVLF
KMSSYSDLIL VDDNA
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