| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4722 |
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| Symbol | hopAO1 |
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| ID | 1186405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5347118 |
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| End bp | 5348524 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637396051 |
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| Product | type III effector HopAO1 |
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| Protein accession | NP_794465 |
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| Protein GI | 28871846 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.37693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCC TGCAACCTAT TCAGCACAGC ATTACAAATT CCCAAATGAG TGGTGGTCAG
CAATTAGAGG CGGAGGGCTC TCAGGCCCAC AATTCCTATT CCCATCCTGA CAGGATTTCG
CTTTCCCAAT TGAGCCAAAG CGCTCACCTA GCTCTAGATC ACCTTTCAAC TCAGCCTAAT
ACCGATCACC AACGCGTTGC ATCACTGGTA CGCAACGCTG TGCAGGACGG TAAGTTCCAA
CTTCAATCCA GTAACGACAC GCAAGTAACC TATAAAACTT CAGTCTGTCC GCCAGCTAAC
GCCGACACCA TGGGGGCCGC CCACTTAATT AATAACGAGC TGACGGTTCA GGCCCGATTA
AATGATCAAC TTGAGTACGA CATCGTCAGC GCTCATTTGT ATGGCCCTTC GGAAGCCATA
TCCATCGATG CATCCAGTCC TCCCTCGGCC AACGATCTAG CGTCCTCTGG CTTGAGCGAA
CGTACGCATC TAGGTATGAA TCGTGTCCTC TTACGCTACG CGGTGCCCCC TCGGGAAACC
GAAGACCAAT GTGTTATGGT GATCGACAAA ATGCCCCCCC CCAAACACGG CAAAATGTCT
TTCTTCCGTA CCACTAATGA CTTGAGCAAA CTGCCTTTGG GAATGGAGAC GGGCGGGTTG
TCCGACCTGA AATTGGCTGG TTGTGAACGT ATTTCTTCCG TCGAGCAGGT GAAGAGTATC
CGCGCAGCGC TTGGAGGCGG GCCGCTCACC GTACTAGATC TGCGCGAAGA ATCTCATGCG
ATTGTCAACG GTTTGCCTAT CACCTTACGT GGCCCGATGG ATTGGGCCAA CGCCGGCCTA
TCCCAGGTTG ACGGAGCGGC ACGTGAAAGT GCCATGATTA CAGAACTGAA GCGCACTAAG
TCTTTAACGT TGGTCGATGC CAATTATGTA AAAGGTAAAA AAAGTAATCC TCAAACGACA
GAACTGAAAA ATTTGAATGT CCGGAGCGAG CGAGAAGTCG TTACAGAGGC CGGCGCGACC
TATCGCCGCG TGGCCATTAC CGACCATAAC AGGCCTAGTC CGGAAGCGAC CGACGAGCTA
GTAGACATCA TGCGCCACTG CCTGCAGGCA AATGAGTCGC TAGTTGTGCA CTGTAACGGC
GGTCGGGGCC GTACTACCAC GGCTATGATA ATGGTCGACA TGCTTAAGAA CGCTCGTAAC
CATTCCGCAG AAACCCTCAT CACGCGTATG GCCAAGCTAA GCTATGACTA CAACATGACG
GATCTAGGCA GCATTTCTGC ACTCAAGCGG CCATTCCTAG AGGACAGACT AAAATTTCTG
CAGGCCTTTC ACGACTATGC CCGCAACAAC CCAAGCGGAT TATCTCTTAA TTGGACACAG
TGGCGCGCAA AAATAGCGTT AGAATGA
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| Protein sequence | MNPLQPIQHS ITNSQMSGGQ QLEAEGSQAH NSYSHPDRIS LSQLSQSAHL ALDHLSTQPN
TDHQRVASLV RNAVQDGKFQ LQSSNDTQVT YKTSVCPPAN ADTMGAAHLI NNELTVQARL
NDQLEYDIVS AHLYGPSEAI SIDASSPPSA NDLASSGLSE RTHLGMNRVL LRYAVPPRET
EDQCVMVIDK MPPPKHGKMS FFRTTNDLSK LPLGMETGGL SDLKLAGCER ISSVEQVKSI
RAALGGGPLT VLDLREESHA IVNGLPITLR GPMDWANAGL SQVDGAARES AMITELKRTK
SLTLVDANYV KGKKSNPQTT ELKNLNVRSE REVVTEAGAT YRRVAITDHN RPSPEATDEL
VDIMRHCLQA NESLVVHCNG GRGRTTTAMI MVDMLKNARN HSAETLITRM AKLSYDYNMT
DLGSISALKR PFLEDRLKFL QAFHDYARNN PSGLSLNWTQ WRAKIALE
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