| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4687 |
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| Symbol | cfa7 |
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| ID | 1186370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5296110 |
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| End bp | 5302310 |
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| Gene Length | 6201 bp |
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| Protein Length | 2066 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637396022 |
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| Product | coronafacic acid polyketide synthetase II |
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| Protein accession | NP_794436 |
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| Protein GI | 28871817 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.120153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGA CCAAGAACAC CGACAGCGAG CGGCTGACCG AAGCCCTGCG GGCTAGTCTG
ATGGCCAACG AAACGCTCAA GCGGCAGAAC CACGAGCTGC AGGCCGCCGC CCAGGAACCC
ATCGCCATCG TCGCCATGGG CTGCCGGTTG CCCGGTGGCC TGGCTTCACC GGAGGCGCTG
TGGCGCCTCG TCGAAGCGGG AGAGGCCTTG AGCAACGCCT TGCCGAGCGA CCGGGGCTGG
CAGCTAGACA GCCTGTTCCC CGCAGACTCG CCGCTCCGCG AACGCGTTGC CGGCTGGCGG
GGTGGTTTTC TCGACAAGGT CGCCGGCTTC GACGCCGCCT TCTTTCGCAT TTCCGACCGT
GAGGCCCTGG CGATGGACCC CCAGCAGCGA CTCCTGCTGG AGGTCTGTTG GGAGGTTCTG
GAACGGGCCG GCATCGTGCC CGACACCCTC AAAAACAGCG CCACCGGCGT GTTTCTCGGC
GCGACTCAGA ACGGCTATCT CGCCGACTTG CAACGGCGTA ACCCGGCTGC CGACGGCTAT
CGCTTGCAGG GAGGACTCAG CAGTATCATC TCGGGACGCA TCGCCTTCGT CCTCGGCCTG
CGAGGCCCGG CGGTAACGGT CGATACCGCC TGCTCCGCTT CCCTTACCGC CATCCACCTA
GCGGTCCAGT CGCTACGCAG CCACGAGTGC TCGCTAGCGC TGGCCGGCGG GGTGACCGTC
ATGGCCACGC CTGAGGTCTT CGCAGAATTC ACCAGGCAGA ACGGCTTGGC CGCCGATGGC
TACTGCAAGG CCTTCGCCGA ACAGGCCGAC GGCACCTGCT TCGCCGAGGG TGCCGGCGTG
TTGCTGTTGG AGCGGCTCGC CGACGCCCAG CGCGCCGGTC ATCCGGTGCT GGCGGTGATC
CGCGGCACCG CAATCAACCA GGACGGCGCC AGTAACGGCC TGACCGCGCC GAGTGGCTCG
GCCCAAGAGC AGGTGATCCA ACTGGCGCTA CAGAATGCGC GGTTACGCTC GCTCGACATC
GACGTGGTCG AGGCGCACGG TACCGGTACC GCGCTGGGCG ATCCCATCGA AGCAGGCGCG
CTGATCAACA CCTATGGGCG CGGACGCCCG CCGGAGCGGC CACTCTGGCT GGGCTCGCTC
AAGAGCAACA TCGGGCACAC CCAGTTGGCG GCGGGCGTCG CCAGCGTCAT CAAGATGGTG
ATGGCGCTGA ACCAGAGCGT GCTCCCCAAG ACCCTGCATG CCCAGGAGCC CTCCCGAAAG
ATCGATTGGT CGGAGCAGAC CGTGCGCCTG CTCGACAGGG CGCGTCCTTG GCCCGAGACC
GACCGGCCCC GGCGGGCCGG AGTGTCGTCG TTCGGCTTCT CCGGCACCAA TGCCCACCTG
ATCCTCGAAC AGGCGCCACC GGCCACGCAG GTTGCCTGTC ACCCGACCGT CGCCGAGCTG
GAAGGGCTGC CAGCCATCAG TTTCCCGCTG TCGGCCGCCT GTGCGAAAGG CTTGCGGGCC
CAGGCGCGCC AGACCATCGC CCTGCTCGAA AACCCGACAA CCGACCTGGC CGCGCTCAAT
GCATCGCTGG CACTGCAGCG CAGCGCCTTC GATCATCGCG CGGTGATTCT GGCCACCCAG
CGCGAAGACG CCCTGATGCA ACTCCGCGCG CTAGCCGAAG GCCGGCATGC CCCGGGCCTG
ATCCAAGGCA AGCGCTCGCC AAGCGGCACG ACCGCCTTTC TGTTTTCAGG CCAGGGCGCG
CAATGGCCGA GCATGGGCCG TAATCTGTAC CGCCTCTGTC CGCCGTTCGC CGCAGCGCTG
GACGAGGTCT GCGCCGCCCT CGACCCCTTG CTGGCGCAGC CGCTCAAGAA CGTCATGTTC
GCCGACAAGG GCAGCGACCG CGCCGCGCTT CTGGATCGCA CCGACTTCAC CCAGCCAGCC
TTGTTTGCCT TTGAGGTGTC CCTGTACCGG ATGCTGCGGC ATTTCGGAAT TGTCCCCGAC
GTGCTGCTGG GCCATTCCAT CGGCGAAATC GCCGCGGCCC ATGTCGCTGG CGTCTTCGCG
CTGGCCGATG CCGCACACTT TGTCGCCGTG CGTGGCCGCC TCATGCAAGC CATCACCCAT
GAGGGCGCGA TGGTCGCCAT CGAAGCGAGC GAGCAGGACG TCAGGGCCAC CTTGGCCGGA
CTCGAACAGA GCGTCGCCAT CGCCGCCGTG AACGCGCCGA CGGCCGTGGT GATCTCCGGC
GATCGCAGTG CGGTCGAGCG CCTGGCCGCG GACTGGCAGC AACGGGGGCA TCGCACCCAA
ATGTTACGGG TCAGCCATGC CTTCCACTCG CCGCACCTCG ACGGCATCCT CGCAGAACTG
CGCCAAACCC TGGCAGGGCT CAGCTTCCAC GCCCCCACCC TGCCCATCGT CTCGACCGTC
ACCGGTATGC CGCTGACCGC CGAGCAGGCG CGCTCGCCCG ATTACTGGGC CGACCAGGCC
CGCCAACCGG TACGCTTCGC CGCTGCGCTG TGCTGGCTGC TGGAGCATCG CCTGACCACG
GCCGTGGAAA TCGGGCCGGA TGCTGTCCTC ACGGCGCTCG GCCGGACCAA CGCGAGCCAC
CATCCCAACG GTGATACGGC GGCGCAGTGG ATCGCCCCCC AGCGTCGCGA CAAGGACGAT
TCTCGCCCGC TGTTCGCAGC GCTCGCCCAG CTATACACCC GCGGCGCCGC GCTGGACTGG
CGCCGCCTGC TGCCGCCCGC CCCCACCTTG GCCTTGCCCA CCTATCCTTT CCAACACCGG
CACTATTGGT TGCAGCCGCG CTCCTGCGCG AACGGCCACG CGGGCAACAT GCCAGGCCTG
CTAGCTCTGG AGCATCCACT GCTGGCGCAC GGGCTCGAAC GTGCCGATGG CCAAGGTTGG
GTGTTCTGGG GGCAACTGGA TGGTTCCCGC CAGCCTTGGT TGCTGGAACA TCGCGTCGGT
GGCCAGGCGT ACGGTGCCGG CGCCATGACC GCAGAGTGCA TCCTGACAAT AGGCAACCGG
CTGGGCTGTC CGTGGCTCCA GGACCTGACA CTGCAACGCC TGGTGCCCTT GCCGGAGCAG
GGTGCGGTCG ATATCCAGAT TTACCTCGAC GTACCCGACG CACAGGGTGT ACGTAACGTC
GCGGCCTACT ATCGCCCGGC GGAGCCAGAT GCCACGGGTG GCTGGCAGCA CTTTGCCAGT
TGCCAGCTGT TGCCCGACCC TACCGAGCCA CCGCTCTGGC CTGACCTGCA GACCGCCGTC
TGGCCGCCAG CCCACGCCGA GCCGACGGCC TTCGCCGACC TCTATGCGCG CCTGGCCGAA
CAGGGCGTGG TACTGGAAGG CTCCTTCCGG CGGATCGTCC GCGCTTGGCA GAGCCCCGAA
GGCATCTACG TAGAAGCGGA GCGTGCCCAT AGCGAGCCAG GCTCGACTTT TACCCTGCAC
CCGACGCTGT TGGACGCAGG CCTGCAATCG GGCCTGCTGG TCGAGGGTGC GGCGTCTTCC
GCCGCCGCAC CACGCCTGCT ATTCTCCATG AGTGGCATGC GCCTGTACCA AGCCGGTGCC
ACGCAGCTAC GTGGCCTGCT GCAACTCAAG GCGCGGCCCA CCTCGCCGAC CGCGCCCCGC
GACTACCGTA TGCGCCTCGC GGACTACCAA GGCCGGGCCG TCGTCACCCT GGACTCAATG
GTGCTGAAGT CGGCCAGCAC AGGCGTCCTA CCACGCCGCC TCGTCGGCTA CCGGGTACTG
TGGCGCGAGG TATCGCCCGA CCACGTGGCT GACCCGCACG AAGCGCTCTG GCTGGGCGCC
AAGGACGACC TGCCGAGCGA TTGCGTCAGC GCTGCCTACC AGCACCTGGC CGACGCGATC
ACCACCTTGG CAACGACGCC ACCCGGCACG GCGCTCGTTC TTGTACCGCC AGTACCCCCG
GCTACGCCGG CCGCGGCGAA CCGCGCCCTG CAAGACCTAG CGGCCACGCT ACGCGAGTGG
CTGGAAGATG AGCGGACGGC AAGGCATCCG TTACTGGTGG CAACCCGCCG GGCGGTGGCC
ACCGCCGATG ACGAAGACGT GCCCAACCTG TCCCAGGCGG CGCTCTGGGG ACTCGTGCGT
ACCGCACAGG AGGAACACCC CGGCCGTATC CTGCTGCTGG ACCTGGATAC CGCACACGCT
ACCCCGCGTG ACTTCGCGCG CGCCTTGGCA GCCGCAAAGG GCGACGAACC GCAATTGGCA
TGGCGCCAGG GGCGTCTGTT GACACCGCGA CTGGTCCGAT CCAGTGGCGT GGAGCCGGCA
ACCGAGCAAC GATCGGACGT CTCGCTCGAT CCGGAGGGCA CCGTGCTAAT CACCGGGGGC
ACCGGCACCT TGGGTCGGGC CCTCGCGCGT CACCTGGTCG CCAAGCACGG CGTACGTCAC
CTGCTCTTGG TGAGTCGTAG CGGTGCCGCC GCGCCCGAGG CCACCGCCTT GGTGGAAGAG
CTGGCCGAAC AGGGGACCGC CACCACGGTC GCCGCCTGCG ACGTCGCCGA CCCGCAGGCC
CTCGCGCAGT TGCTGGACGG CCTGCCCGCA CGGCATCCAC TGACCGCCGT CTTCCATGTC
GCTGGCGTCA TCGAGCCGGC GCCTCTGTTG CAACTCACCC CCGCACAGCT CGAAGCGGTG
GTAAGGCCCA AACTGGACGC GGCCTGGCAA CTCCACCTCC AGACCCGCCA TCGAAACCTG
GCTGCCTTCG TTCTCTATTC CTCGGCAGCC GGCCTGCTGC CCCAGCCGGG CCAGAGCCAC
TACGCCGCAG CCAACACCTT CCTCGATGCC CTCGCCCACC ATCGTCGCCA CTTGGGCTTG
CCCGCAGTGG CCCTGGCCTG GGGCCTGTGG GCCGAGCGCT CGGCCATGGG TGAACGAATG
GCCGCCGCGG GTATCCAGGA ACTGCTCGAC CGAGGTCAGT TGCCCATCGC CCTGGAGGAT
GGCCTGAGCC AAGTGGATCT GGCGCTGACC GGCTCCCTGC CGCCCCTCGC GATTCCTGCA
CGCCTGGACC TGCCGGCACT CCGCCGCCAT GGCCCCCTGG CGCTGCTGCG CGAATTGCTC
GCCGAAGGCA GCGGGCAGAC GGCAAGCCAA GGCCCCGAAG CGTTGGCGAA ACTGGCTCCC
ACCGAGCGGC GGACACGCCT GCTCGCGGTG ATTGCCCAAG GGGTCGGTGA GGTGCTCGAG
CATCCCGATC CAGCGGCGAT ACCTGGGGAT ACCGAGTTCC TTGTCCTAGG TTTCGATTCC
CTCACGGCCG TCGAGTTGGG CAGTTGGCTG GCGGCCACCA CCGGCATCCG CTTGCCGTCC
ACGGCCGTGT TCGACCATCC GACCCCCAGC GCCTTGGCCG ACCACCTGAG CGCCTGCCTA
GACCAACCGG AGCGCGCCCC AGCGCCAACC ATCGCGACAG TGGGCATGCT TTTCGAAGAA
TTGCGCGAGG CTATGCGGCA GGGGCGTCTG GCACAGGGGC TGGAACGATT GGCGCAATTC
GCGGCCAAAC GTCCGACGTT TGCCCCGGAT GCCGCCGAAG GGCACGCGCC CGCGCCCAGC
TGGTCGCGAC AAGAGCGTGA CCGGCCACTG CTCATCTGCC TGAACTCCTT TCTGCCCGCA
AGGGCCAATC TCACCTATCA GCGCTTGGGC CGCGAACTCA AAGGCCACTA TGACATGGCC
ACCTTGCCCC TGCCTGGCTA CGATAACGGG CCGTTGCCGG CCTCCGCCGA AGCTGTTGCA
GTGGCGCTCG CGCACGCCGT CGAAGCCTGC GCTGCCGGTC GCCCCTTCAC GCTGCTCGGC
TTTTCCACCG GCGGACTGGT CGCCTATGCA GTCGCCGAGC TCCTGCAACA GCGCGGCATC
CACCCCGCGG CCCTCTGCCT GATCGACACC TACCCGCCGG CCGCCATGCG TTCGGCGGTC
CTTAAGGAAG TCCTGAGCGA TTGGTTGGAA AGCCGCAGCG ACTTCTGGTC GACCGACGAC
GACGGCCTGA GCGCCATGGC CTATTACCTG GAGCTCTTTG GCCGCTGGAG CCCCCTGCCG
CTGGAGGCTC CGGTCCTGCT GCTGCAGGCG GAGCAGGCCT CCGCAGCGGG CGCCAGCGAC
ACCTGGCCGC AACTTTGGCC ACGCCTGACG CAGGTGGTGA AGACGTCTGG ACGGCACTTC
GCCCTGCTCA GCGATGAGGT GCAGCAAACC GCACAGCACC TCATCCTGGT GCTGGCGGAC
TACAGCGGAG CGGCGTCATG A
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| Protein sequence | MTETKNTDSE RLTEALRASL MANETLKRQN HELQAAAQEP IAIVAMGCRL PGGLASPEAL
WRLVEAGEAL SNALPSDRGW QLDSLFPADS PLRERVAGWR GGFLDKVAGF DAAFFRISDR
EALAMDPQQR LLLEVCWEVL ERAGIVPDTL KNSATGVFLG ATQNGYLADL QRRNPAADGY
RLQGGLSSII SGRIAFVLGL RGPAVTVDTA CSASLTAIHL AVQSLRSHEC SLALAGGVTV
MATPEVFAEF TRQNGLAADG YCKAFAEQAD GTCFAEGAGV LLLERLADAQ RAGHPVLAVI
RGTAINQDGA SNGLTAPSGS AQEQVIQLAL QNARLRSLDI DVVEAHGTGT ALGDPIEAGA
LINTYGRGRP PERPLWLGSL KSNIGHTQLA AGVASVIKMV MALNQSVLPK TLHAQEPSRK
IDWSEQTVRL LDRARPWPET DRPRRAGVSS FGFSGTNAHL ILEQAPPATQ VACHPTVAEL
EGLPAISFPL SAACAKGLRA QARQTIALLE NPTTDLAALN ASLALQRSAF DHRAVILATQ
REDALMQLRA LAEGRHAPGL IQGKRSPSGT TAFLFSGQGA QWPSMGRNLY RLCPPFAAAL
DEVCAALDPL LAQPLKNVMF ADKGSDRAAL LDRTDFTQPA LFAFEVSLYR MLRHFGIVPD
VLLGHSIGEI AAAHVAGVFA LADAAHFVAV RGRLMQAITH EGAMVAIEAS EQDVRATLAG
LEQSVAIAAV NAPTAVVISG DRSAVERLAA DWQQRGHRTQ MLRVSHAFHS PHLDGILAEL
RQTLAGLSFH APTLPIVSTV TGMPLTAEQA RSPDYWADQA RQPVRFAAAL CWLLEHRLTT
AVEIGPDAVL TALGRTNASH HPNGDTAAQW IAPQRRDKDD SRPLFAALAQ LYTRGAALDW
RRLLPPAPTL ALPTYPFQHR HYWLQPRSCA NGHAGNMPGL LALEHPLLAH GLERADGQGW
VFWGQLDGSR QPWLLEHRVG GQAYGAGAMT AECILTIGNR LGCPWLQDLT LQRLVPLPEQ
GAVDIQIYLD VPDAQGVRNV AAYYRPAEPD ATGGWQHFAS CQLLPDPTEP PLWPDLQTAV
WPPAHAEPTA FADLYARLAE QGVVLEGSFR RIVRAWQSPE GIYVEAERAH SEPGSTFTLH
PTLLDAGLQS GLLVEGAASS AAAPRLLFSM SGMRLYQAGA TQLRGLLQLK ARPTSPTAPR
DYRMRLADYQ GRAVVTLDSM VLKSASTGVL PRRLVGYRVL WREVSPDHVA DPHEALWLGA
KDDLPSDCVS AAYQHLADAI TTLATTPPGT ALVLVPPVPP ATPAAANRAL QDLAATLREW
LEDERTARHP LLVATRRAVA TADDEDVPNL SQAALWGLVR TAQEEHPGRI LLLDLDTAHA
TPRDFARALA AAKGDEPQLA WRQGRLLTPR LVRSSGVEPA TEQRSDVSLD PEGTVLITGG
TGTLGRALAR HLVAKHGVRH LLLVSRSGAA APEATALVEE LAEQGTATTV AACDVADPQA
LAQLLDGLPA RHPLTAVFHV AGVIEPAPLL QLTPAQLEAV VRPKLDAAWQ LHLQTRHRNL
AAFVLYSSAA GLLPQPGQSH YAAANTFLDA LAHHRRHLGL PAVALAWGLW AERSAMGERM
AAAGIQELLD RGQLPIALED GLSQVDLALT GSLPPLAIPA RLDLPALRRH GPLALLRELL
AEGSGQTASQ GPEALAKLAP TERRTRLLAV IAQGVGEVLE HPDPAAIPGD TEFLVLGFDS
LTAVELGSWL AATTGIRLPS TAVFDHPTPS ALADHLSACL DQPERAPAPT IATVGMLFEE
LREAMRQGRL AQGLERLAQF AAKRPTFAPD AAEGHAPAPS WSRQERDRPL LICLNSFLPA
RANLTYQRLG RELKGHYDMA TLPLPGYDNG PLPASAEAVA VALAHAVEAC AAGRPFTLLG
FSTGGLVAYA VAELLQQRGI HPAALCLIDT YPPAAMRSAV LKEVLSDWLE SRSDFWSTDD
DGLSAMAYYL ELFGRWSPLP LEAPVLLLQA EQASAAGASD TWPQLWPRLT QVVKTSGRHF
ALLSDEVQQT AQHLILVLAD YSGAAS
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