| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4640 |
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| Symbol | radA |
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| ID | 1186323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5243215 |
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| End bp | 5244582 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395977 |
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| Product | DNA repair protein RadA |
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| Protein accession | NP_794391 |
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| Protein GI | 28871772 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGG CCAAACGCTT GTACGGCTGC ACCGAATGCG GCGCGACATT TCCCAAGTGG
GCGGGCCAGT GTGCTGATTG CGGCGCCTGG AACACACTGG TCGAAACCAT GATCGAAAGC
GGTGCCGCCG CGCCTCCCAG CGGGCGCACC GGCTGGACCG GCTCACAGGC GCAGATCAGA
ACCCTGGCGC AAGTCAGCGT TGAAGAGATC CCGCGTTTCT CCACCAACTC CGCCGAACTC
GACAGGGTGC TCGGTGGCGG TCTGGTGGAT GGTTCTGTGG TGCTGATCGG CGGCGACCCT
GGCATCGGCA AGTCGACGAT TCTGTTGCAA ACGCTGTGCA ACATCGCCCA GCGCATGCCT
GCGCTGTATG TCACCGGCGA GGAATCCCAA CAGCAGGTGG CCATGCGCGC CCGCCGTCTG
GGCCTGCCGC AGGACAAACT GCGGGTCATG ACCGAAACCT GCATCGAAAC CATTATTGCC
ACCGCCAAGG TCGAGAAGCC CAAGGTGATG GTGATTGACT CGATCCAGAC GATCTTCACC
GAGCAATTGC AGTCCGCACC GGGTGGCGTG TCGCAAGTGC GCGAAAGCGC CGCCTTGCTG
GTGCGCTATG CCAAGCAGAG TGGCACCGCG ATTTTCCTGG TGGGGCATGT CACCAAGGAA
GGCGCACTGG CGGGGCCGCG TGTGCTTGAG CACATGGTCG ATACCGTGCT GTATTTCGAG
GGCGAGTCGG ACGGTCGTCT GCGTTTGCTG CGCGCTGTAA AGAACCGTTT CGGCGCGGTA
AACGAACTGG GTGTGTTCGG CATGACCGAC AAGGGCCTGA AAGAAGTGTC CAATCCGTCG
GCGATTTTTC TGACCCGTGC GCAGGAAGAA GTCCCCGGCA GCGTGGTCAT GGCCACATGG
GAAGGCACCC GGCCGATGCT GGTCGAAGTT CAGGCGCTGG TGGATGACAG CCATATGTCC
AATCCGCGCC GCGTAACCCT GGGCCTGGAT CAGAACCGTC TGGCGATGCT GCTGGCGGTG
CTGCACCGGC ATGGCGGCAT TCCAACCCAC GACCAGGACG TGTTCCTCAA TGTGGTGGGC
GGGGTCAAAG TGCTGGAAAC CGCGTCCGAT CTGGCCTTGA TGGCCGCAGT CATGTCCAGC
CTGCGCAATC GCCCGCTGCC GCATGACTTG CTGGTGTTTG GCGAGGTGGG GCTGTCGGGT
GAGGTCAGGC CGGTGCCCAG CGGGCAGGAG CGCTTGAAAG AGGCTGCCAA GCACGGCTTC
AAACGGGCCA TCGTGCCGAA AGGCAATGCG CCGAAAGAAG CGCCTCCCGG TCTGCAGATC
ATTGCGGTCA CGCGTCTGGA ACAGGCGCTG GATGCGCTGT TCGAGTAA
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| Protein sequence | MAKAKRLYGC TECGATFPKW AGQCADCGAW NTLVETMIES GAAAPPSGRT GWTGSQAQIR
TLAQVSVEEI PRFSTNSAEL DRVLGGGLVD GSVVLIGGDP GIGKSTILLQ TLCNIAQRMP
ALYVTGEESQ QQVAMRARRL GLPQDKLRVM TETCIETIIA TAKVEKPKVM VIDSIQTIFT
EQLQSAPGGV SQVRESAALL VRYAKQSGTA IFLVGHVTKE GALAGPRVLE HMVDTVLYFE
GESDGRLRLL RAVKNRFGAV NELGVFGMTD KGLKEVSNPS AIFLTRAQEE VPGSVVMATW
EGTRPMLVEV QALVDDSHMS NPRRVTLGLD QNRLAMLLAV LHRHGGIPTH DQDVFLNVVG
GVKVLETASD LALMAAVMSS LRNRPLPHDL LVFGEVGLSG EVRPVPSGQE RLKEAAKHGF
KRAIVPKGNA PKEAPPGLQI IAVTRLEQAL DALFE
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