Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4634 |
Symbol | |
ID | 1186317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5237118 |
End bp | 5237831 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637395971 |
Product | N-acetylmuramoyl-L-alanine amidase, putative |
Protein accession | NP_794385 |
Protein GI | 28871766 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.673523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA AATTTACCAC TGAAGCAAAA GCAACTGAAG TAAAACCCGG CCCGCCTAAA GCTTCCACCA CCATCACGAT TAACGATAGA GCCGCGACCA GAGAAGCGAT AATCAGGCTT CTTAAAAAAT ACAAATGCGA GTTCTCAGAA CGATCGTCTT GGGGGGCGCA TAAAGCAAAA GGTGAGATGG TTGATGATTG GGACTACACG ATGATAGCCC TTCACCATGC AGGCCGGAGT GTAGGCTGCG GTCTTGGCGC AGAACAAATG CGCGACATTC AAAAAGAGCA TCAGGCTAAA TTTGATGATA TCGGTTACCA CTACGGCATC GACTGCATGG GAAAAGTCTT CGAAGGGAGG GACATAAGAT TCAAAGGCTC AAGTGTACAT AACTACAACA CAGGTGTAAT TGGTATCGTT TTACTAGAAA ACCTGACAAC TGCCGAAGAA GGTGGCGATG TTGTAGCTCT GGCTCGCCAG GCTCTTGAAA CCCTAAACGG TAACATGGAC CAGAAAATAC CTGCCGTACA AATCGACGCT CTTCTGACTT TGATTCACGC CCTAACCAGT GTTTTTAAAG TTACAACTTT AGGCGGACAC CGTGAATTCC CTATGCAGGC CGGTGAAGGG AAAATTTGCC CTGGTAACAT TGGAATGGAG TTAGTGAGAA ATCTTCGAGT CAAAACTAAA CTTTTGCGGC CACCCTCATC ATGA
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Protein sequence | MAEKFTTEAK ATEVKPGPPK ASTTITINDR AATREAIIRL LKKYKCEFSE RSSWGAHKAK GEMVDDWDYT MIALHHAGRS VGCGLGAEQM RDIQKEHQAK FDDIGYHYGI DCMGKVFEGR DIRFKGSSVH NYNTGVIGIV LLENLTTAEE GGDVVALARQ ALETLNGNMD QKIPAVQIDA LLTLIHALTS VFKVTTLGGH REFPMQAGEG KICPGNIGME LVRNLRVKTK LLRPPSS
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