Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4622 |
Symbol | |
ID | 1186305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5216974 |
End bp | 5217408 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637395959 |
Product | transcriptional regulator, MerR family |
Protein accession | NP_794373 |
Protein GI | 28871754 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.821242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGAA TCGGGGCGCT GTCGAAATCA ACGGGTTGCC ACATTGAAAC GATTCGCTAC TACGAGAAAA TAGGCCTTTT ACCTCCCGCC CTGCGGTCGA CTGGGCGTCA TCGAATCTAT ACTGAAAAGC ATCGATCAAG ACTCGTCTTC ATCCGGCAGA ATCGTGAATT GGGTTTCCCG CTCGAAGATA TCCGAGAACT CATCGCGCTC GCAGCAGATG CTGATCGTCC GTGCGCTGAC GCGCTTTCGG TGGTCAAGAA GCACCTAGCG GAAGTAGAGT CGAAGGTAGC AAAGCTTCAG CAAATCCGGG TAGAGCTGCT CTCAATGGCA GGTATGTGTG AGTCAACATG CTTAGGTTCG AACACTCCAG ACTGCACGAT TGTTGAGTCA CTTTTTGAAC CTGCTGCTGG GGTTCGCTCT GGTTGCTGCT CCTAG
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Protein sequence | MSGIGALSKS TGCHIETIRY YEKIGLLPPA LRSTGRHRIY TEKHRSRLVF IRQNRELGFP LEDIRELIAL AADADRPCAD ALSVVKKHLA EVESKVAKLQ QIRVELLSMA GMCESTCLGS NTPDCTIVES LFEPAAGVRS GCCS
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