| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4569 |
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| Symbol | |
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| ID | 1186252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5162342 |
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| End bp | 5164810 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395908 |
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| Product | iron-uptake factor |
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| Protein accession | NP_794320 |
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| Protein GI | 28871701 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGCCC TGATGGGCAT CACCGGCGCC CTGTATTCGT TCGAGGACGA AATTCTCGAC
GTGCTCAATC CTGACACTCT GCTTGTCGAA GAGCGCGCTG CTGCATTGCC TCCCCTCGAA
CTTGTCCACA AGCTGGAGGC CGCAACGGGG CTCACCGTGG CTATCTTGCG TGTCGAGACT
CTCGGCAATC GCGCCGCTCA GGTGTATTTC ACGCCGGAGC CGGGCGAAAG GCGTGGCCCC
AAACGCAATT TCGATCCTTA TACCGGCGAG CTGAAAGGCG ATGCGCTGGG CGAGGGGTTT
TTCGATTTTA TTCTGCAAGT GCATCGTTAT CTGGCTGCCG GTGAAGTGGG CAAGCAGGTC
ACCGCAGCCT GTACGCTGAT TCTGCTGTTC TTCTGCCTGT CTGGGCTCTA TCTGCGCTGG
CCTCGCAATG CCTTGAGCTG GCGTGTCTGG CTGACGATGG ACTGGGCGAA AAAGGGCCGC
AGTTTCAACT GGGACCTGCA TTCGGTTTTC GGTACGTGGT GCCTGTTGTT CTACCTGTTG
TTCGCGATTA CGGGCTTGAA CTGGTCGTAT GACTGGGTGA GCAATGGTCT GAACACTTTG
ATGGGGGATG CGCCGTCAGT ACAGCGCAAG GCCTCTGTGG TCACGGCTAA CAAAACCGCA
CCGTTGGTGG TCGATTACGC AGCGGTCTGG GGCAGTATTC AGAAGACGGC CGGGCCTGAA
CTGCGCGCCT ATAATCTGCG CCTGCCTGCG TCCGGCGGCC AACCGGCCAC GGTGTTCTAT
CTGCTCAAGG ATTCACCACA CCCGCGCGCC CTGAACAGCA TCACCCTGGA CCCTGCAAAC
GGCCAGGTCA GTGCGGTTTC GCGCTACGCA GAGCGTGGTT TGGGGGCGCA ACTGCTGGCC
AGCAACTATG CGCTGCACGT CGGCAGCTAC TTTGGCCTGG CTGGTCGAAT CATCATGACG
GGTGCCTCAT TGATGATGCC GCTGTTCTTT ATTACTGGCT GGTTGCTGTA CCTGGATCGC
CGTCGCAAAA AGCGCGATGT CAGGAGTGCG CGTGGCGAGT TGCAGGATGA TGCGTGCGGT
GATGCGTCGT CCTGGCTGAT TGGCTTTGCC AGCCAGAGCG GCTTCGCCGA GCAACTGGCC
TGGCAGACTG CCGCCCGGTT GCAGGCGTCA GGCTTGCCCG TGCGTGTGAA GCGTCTAGGG
GATTTGACCG AAGAAGATTT CAGCCAGAGC CGCAAGGCGT TGTTTGTCGT CAGCACGTTT
GGCGATGGAG AGGCGCCTGA CAGTGCGCGG GGGTTCGAGC GTAAGTTGCT GGGCCGTCGG
CTGGCAGTGG AGCACCTCGA TTATGCCGTG CTGGCGCTGG GCGACCGGCA ATATCAGCAT
TTCTGCGGCT TCGCCCATCG CCTGCATGAC TGGCTGGCAG AGCAGGGTGC GCGTACGTTA
TTCGCGCCTG TCGAGGTAGA CAGCGCCGAT CCTGCGGCAC TGCAGCATTG GCAACAACAA
CTGGGGCAAC TGACCGGCTC TGTGCCCTTT GCCCACTGGC AGGCACCGGT TTTCGAAAAC
TGGACGCTGG TCCGTCGCGA GCATTTGAAC CCTGGCAGCA GTGGTTCCAA GGTGTTCAGG
CTTGAGCTGA TGGCATCCGG TTTGATGAGC TGGCAAGCGG GTGATCTGGT TGAGGTGATG
CCGCGCAACG CTGCGCAGGT CATCGGGCAA TACCTTCACG GCCTGGGCGT CGATCCTTTG
AGCCCGGTCA GCGTTGAGGA CTTGCAGGAA ACGCTTGCTC AGGCACTGGC AACCCGCCAG
TTGCCGCATA ACCGTGCGCA TCTGGTGGGG TTGCATGCAC AAGCGCTGAT CGATGCGCTG
GTGCCGATAT CCGCTCGAGA GTACTCGATT GCTTCTATTC CCGAGGAAGG GGGCCTGCAC
CTGATTGTGC GTCAGGAGGT TCATCCTGAC GGCAGTCTGG GGCTGGGTTC CGGCTGGCTG
ACCGAACATG CCGCCCTTGA CAGTACGGTC AGTCTGCGAG TACGCCGCAA CAGCAGCTTT
CATTTGCCGG CTGAACCTGT CCCGCTGATT CTGTTGGGCA ACGGCACAGG GCTGGCCGGC
TTGCGCAGCC TGCTCAAGGC CCGCATTGCT CAAGGGCAGA CGCGCAACTG GCTGCTGTTC
GGTGAACGCA ATCGCGCCCA CGACTTTCAT TGTGGCGCCG AGCTTGAGGG CTGGCTTGAG
TCGGATGCTC TGGCTCGCCT GGACCTGGCT TTCTCCCGTG ATCAGGCAGA AAAGATCTAC
GTACAGGATC GCTTGCGTGA GGCTGCTGCC GAACTGCGTG TATGGCTGGA CGACGGCGCG
GCGATTTACA TCTGCGGCAG TCTTCTGGGC ATGGCGGCGG GAGTGGATCA GGTGTTGCAC
GAGGTGCTGG GCGCGGCGGT GGTCAGCGAG TTGATCGAGC AGGGGCGCTA TCGGCGAGAT
GTCTATTGA
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| Protein sequence | MLALMGITGA LYSFEDEILD VLNPDTLLVE ERAAALPPLE LVHKLEAATG LTVAILRVET
LGNRAAQVYF TPEPGERRGP KRNFDPYTGE LKGDALGEGF FDFILQVHRY LAAGEVGKQV
TAACTLILLF FCLSGLYLRW PRNALSWRVW LTMDWAKKGR SFNWDLHSVF GTWCLLFYLL
FAITGLNWSY DWVSNGLNTL MGDAPSVQRK ASVVTANKTA PLVVDYAAVW GSIQKTAGPE
LRAYNLRLPA SGGQPATVFY LLKDSPHPRA LNSITLDPAN GQVSAVSRYA ERGLGAQLLA
SNYALHVGSY FGLAGRIIMT GASLMMPLFF ITGWLLYLDR RRKKRDVRSA RGELQDDACG
DASSWLIGFA SQSGFAEQLA WQTAARLQAS GLPVRVKRLG DLTEEDFSQS RKALFVVSTF
GDGEAPDSAR GFERKLLGRR LAVEHLDYAV LALGDRQYQH FCGFAHRLHD WLAEQGARTL
FAPVEVDSAD PAALQHWQQQ LGQLTGSVPF AHWQAPVFEN WTLVRREHLN PGSSGSKVFR
LELMASGLMS WQAGDLVEVM PRNAAQVIGQ YLHGLGVDPL SPVSVEDLQE TLAQALATRQ
LPHNRAHLVG LHAQALIDAL VPISAREYSI ASIPEEGGLH LIVRQEVHPD GSLGLGSGWL
TEHAALDSTV SLRVRRNSSF HLPAEPVPLI LLGNGTGLAG LRSLLKARIA QGQTRNWLLF
GERNRAHDFH CGAELEGWLE SDALARLDLA FSRDQAEKIY VQDRLREAAA ELRVWLDDGA
AIYICGSLLG MAAGVDQVLH EVLGAAVVSE LIEQGRYRRD VY
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