| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4561 |
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| Symbol | dppA |
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| ID | 1186244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5154604 |
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| End bp | 5156199 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637395902 |
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| Product | dipeptide ABC transporter, periplasmic dipeptide-binding protein |
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| Protein accession | NP_794314 |
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| Protein GI | 28871695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACTGC TATCGCTCCG CGCGTCGATT GCCATTGCGC TGCTCAGCGC CGCCGCAACC
GTTTCGGCCA AACCCCTGGT GGTCTGCACC GAGGCGAGTC CTGAAGGTTT CGATATCGTG
CAGTATTCGA CTGCCGTAAC GGCAGATGCC TCGGCCGAAA CCATTCTTGA ACGCCTGGTA
GCCTTCACTC CAGGCACTAC CGATACTGTA CCGGGCCTGG CTGAAAGCTG GGACATCAGC
CCCGACGGTC TGACGTACAC CTTCAAGCTG CGAAAAGGCG TCAAATTCCA CACCACCGAC
TACTTCAAGC CCACCCGCGA AATGAATGCC GACGACGTGG TCTGGAGCTT CAAGCGCCAG
CTGGACCCCA AGCATCCGTG GCACGCACTT TCGCTGGTCG GCTACCCCTA TTTTGAAAGC
ATGGGCTTCC AGGACTTGCT CAAAGACGTA GAAAAAGTTG ACGACTCCAC CGTCAAGTTC
ACCCTCGCGC ACCCCGAGTC GCCCTTCCTG CGTGATCTGG CAATGCCGTT CACCTCGATC
TATTCCGCCG AATACGCCGA TCAGTTGCTC AAGAATAACA AGACCGCCGA ATTCAACAGC
AAACCGATTG GCACTGGCCC GTTCATCCTG ACTCGCTATG CCAAAGACGC TCAGGTCCGC
TATAAAGCCA ACCCGGATTA CTGGAAAGGC AAGGTGCCGA GTGAAACGCT GATATTTGCC
ATCACTCTGG ACAACAACAC ACGCCTGCAA AAGCTCAAGG CGAATGAATG TCAGGTTGCG
CTTTACCCAA AACCTGACGA TATTGCCAAC ATCAAGGCCG ACCCCAATCT CAAGATCGAC
GAGATGGAGT CCATGATGAC CAGCTACGTG GCTATCAACA CCTCGCACAA ATACCTGAGC
GATGTGCGTG TGCGGCAAGC GATCAATCTG GCCTTCGACA AGAAGTCCTA CATCAGGGCG
CTGTTTGGCG AAGGCAAGGC CACTGAGGGT GTTGGCCCGT ATCCACCGAC CATGATGGGT
TATGACACCG ACAGCAAGAG TCCCGCATAC GATCCTGACA AGGCCCGTGC ACTGCTCAAG
GAAGCTGGAG TACCCGAGGG CCAGGTCTTC ACCCTGTTTG CTCGCAATGG CGGAGCCGTG
ACCAACCCCA ACCCGATGGT AGGCGCACAG ATGCTTCAAT CGGACATGGC CAAGGTCGGG
ATCAAGATAG ACATTCGCAT CATGGAATGG GGCGAAATGC TCAAGCGCGC CAAAAATGGC
GAACATGACA TGGTGTTTGC AGGGTGGGCT GGCGACAATG GCGATCCGGA TAACTTCCTG
ACCCCCAACC TGAGCTGCGA CGCGGCCAAA AATGGTGAGA ATTATGCCCG CTGGTGCAAC
AAGGCGTTCG AGGACGCAAT CACTCAAGCC CGGAAAATAA CCGAACCAGC GGAACGTGCC
GCCCTCTATA AGCAGGCTCA ACAAGTGTTC AATCACGAAC AGCCCTGGAT CAGCCTGGCT
TACCCGAAAC TGTTCGTTGC AATGCGCAAA GATGTCGAAG GCTTTCAAAT AAGCCCGCTG
ACCAATAACA ACTTCACCAC TACCAGGGTG AAGTAG
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| Protein sequence | MKLLSLRASI AIALLSAAAT VSAKPLVVCT EASPEGFDIV QYSTAVTADA SAETILERLV
AFTPGTTDTV PGLAESWDIS PDGLTYTFKL RKGVKFHTTD YFKPTREMNA DDVVWSFKRQ
LDPKHPWHAL SLVGYPYFES MGFQDLLKDV EKVDDSTVKF TLAHPESPFL RDLAMPFTSI
YSAEYADQLL KNNKTAEFNS KPIGTGPFIL TRYAKDAQVR YKANPDYWKG KVPSETLIFA
ITLDNNTRLQ KLKANECQVA LYPKPDDIAN IKADPNLKID EMESMMTSYV AINTSHKYLS
DVRVRQAINL AFDKKSYIRA LFGEGKATEG VGPYPPTMMG YDTDSKSPAY DPDKARALLK
EAGVPEGQVF TLFARNGGAV TNPNPMVGAQ MLQSDMAKVG IKIDIRIMEW GEMLKRAKNG
EHDMVFAGWA GDNGDPDNFL TPNLSCDAAK NGENYARWCN KAFEDAITQA RKITEPAERA
ALYKQAQQVF NHEQPWISLA YPKLFVAMRK DVEGFQISPL TNNNFTTTRV K
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