Gene PSPTO_4559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4559 
Symbol 
ID1186242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5151411 
End bp5153003 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content59% 
IMG OID637395900 
Productdipeptide ABC transporter, periplasmic dipeptide-binding protein 
Protein accessionNP_794312 
Protein GI28871693 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA CGCTTGCAGT GACGTCATGC CTTGGGCTTT TGGCTCTGGC CCCTTTTACC 
CAGGCGGCAA GCAATCTGGT GTTCTGCTCG GAAGCGAGTC CTGCGGGCTT TGACGGCGCG
CAGTACACCT CCTCCACCGA TAATGACGCG TCAGAGCCGA TCTACAACCG CCTGACCGAA
TTCAAGCAGG GCGATACCAC GGTGGTGCCT GCGCTGGCGA CCTCATGGGA TGTTTCAGAG
AACGGCCTGA CCTACAGGTT TCATCTGCGC GAAGGCGTGA AGTTTCACAG CAACAAGAAC
TTCACCCCCA GCCGTGATTT CAATGCCGAC GACGTGGTCT TCACCTTCAA TCGAATGCTC
AAACCTGACC ACCCGTTTCG CGTCGCTTAC CCGACCGAGT TCCCCTACTT CACCAGTATG
GGCCTGAACA AGAAGATCAA GTCCGTCGAG AAGACCGACC CGCTGACCGT GGTGTTCACC
CTCAACATGG TCGATGCGGC ATTCATCCAG AACATCGCGA TGAACTTTGC CGGCATTCTC
TCCGCCGAGT ACGCCGAACA GCTGATGGCC AAAGGTGATG TGCGCGACAT CAATCAACAG
CCTATCGGTA CCGGGCCGTT CGTGTTTCAG CGCTACCAGA AGGACTCGCA GATTCGTTAC
AAGGGCAACA AGGAGTTCTG GGACCCGAGC CGGGTAAAAA TCGACCAGTT GATCTTCGCC
ATCGTGACCG ACGCCTCGGC GCGCATGCAA AAGCTCAAGG CCGACGAGTG CCAGGTGTCG
GTCAACCCGC GTCCGGCAGA CCTCGCCAAG CTCAAGGAAG ACAAAAGCCT GCAGATTATC
GAGAAGCCAG GTTTAAACCT CGGCTACATC GCCTACAACG TGCGCCACGA ACCGCTGGGC
AAGCTGGAAG TGCGTCAGGC GCTGGACATG GCCGTCAACA AGAAAGCCAT CATCAACGCG
GTTTACCAGG GCGCGGGGCA ACTGGCAGTC AACGCCATGC CACCGACCCA GTGGTCCTAT
GACGCCAGCA TCAAGGACGC ACCTTACGAC CCGGAAAAAG CCAGGACCCT GTTGCGTGCC
GCGGGCATCA AGGAAGGCAC CGAACTGACC CTGTGGGCCA TGCCGGTTCA GCGTCCTTAC
AACCCCAACG CCAAGCTGAT GGCCGAAATG CTTCAGGCCG ACTGGGCCAA GGTGGGTATC
AAGGTCAAAA TCGTCAGTTA CGAATGGGGC GAATACCTCA AACGCACCAA GAACGGCGAG
CACGATATCT CGCTGATCGG CTGGACCGGG GACAACGGTG ACCCGGACAA CTGGCTGGGC
ACGCTGTACA GCTGCGCGGC GATTGGCGGC AACAACTACT CGATGTGGTG CGACGAAAAA
TACGACCAAC TGGTCAAGGC GGCCGTCGCG ACCACCGACC GAGAGAAGCG CACCGACCTG
TACCAACAGG CGCAGCGCTA CCTCAAGGAG CAGGTGCCGA TTACCCCGGT GGCCCACTCC
ACCGTCAATC AGCCGTTGCG CGCCGAGGTC AGGGACTTCC ACGTCAGCCC GTTTGGCCGC
AACAACTTTT CGGGCGTGAG CATCGCCGAT TGA
 
Protein sequence
MRKTLAVTSC LGLLALAPFT QAASNLVFCS EASPAGFDGA QYTSSTDNDA SEPIYNRLTE 
FKQGDTTVVP ALATSWDVSE NGLTYRFHLR EGVKFHSNKN FTPSRDFNAD DVVFTFNRML
KPDHPFRVAY PTEFPYFTSM GLNKKIKSVE KTDPLTVVFT LNMVDAAFIQ NIAMNFAGIL
SAEYAEQLMA KGDVRDINQQ PIGTGPFVFQ RYQKDSQIRY KGNKEFWDPS RVKIDQLIFA
IVTDASARMQ KLKADECQVS VNPRPADLAK LKEDKSLQII EKPGLNLGYI AYNVRHEPLG
KLEVRQALDM AVNKKAIINA VYQGAGQLAV NAMPPTQWSY DASIKDAPYD PEKARTLLRA
AGIKEGTELT LWAMPVQRPY NPNAKLMAEM LQADWAKVGI KVKIVSYEWG EYLKRTKNGE
HDISLIGWTG DNGDPDNWLG TLYSCAAIGG NNYSMWCDEK YDQLVKAAVA TTDREKRTDL
YQQAQRYLKE QVPITPVAHS TVNQPLRAEV RDFHVSPFGR NNFSGVSIAD