Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4559 |
Symbol | |
ID | 1186242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5151411 |
End bp | 5153003 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395900 |
Product | dipeptide ABC transporter, periplasmic dipeptide-binding protein |
Protein accession | NP_794312 |
Protein GI | 28871693 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAA CGCTTGCAGT GACGTCATGC CTTGGGCTTT TGGCTCTGGC CCCTTTTACC CAGGCGGCAA GCAATCTGGT GTTCTGCTCG GAAGCGAGTC CTGCGGGCTT TGACGGCGCG CAGTACACCT CCTCCACCGA TAATGACGCG TCAGAGCCGA TCTACAACCG CCTGACCGAA TTCAAGCAGG GCGATACCAC GGTGGTGCCT GCGCTGGCGA CCTCATGGGA TGTTTCAGAG AACGGCCTGA CCTACAGGTT TCATCTGCGC GAAGGCGTGA AGTTTCACAG CAACAAGAAC TTCACCCCCA GCCGTGATTT CAATGCCGAC GACGTGGTCT TCACCTTCAA TCGAATGCTC AAACCTGACC ACCCGTTTCG CGTCGCTTAC CCGACCGAGT TCCCCTACTT CACCAGTATG GGCCTGAACA AGAAGATCAA GTCCGTCGAG AAGACCGACC CGCTGACCGT GGTGTTCACC CTCAACATGG TCGATGCGGC ATTCATCCAG AACATCGCGA TGAACTTTGC CGGCATTCTC TCCGCCGAGT ACGCCGAACA GCTGATGGCC AAAGGTGATG TGCGCGACAT CAATCAACAG CCTATCGGTA CCGGGCCGTT CGTGTTTCAG CGCTACCAGA AGGACTCGCA GATTCGTTAC AAGGGCAACA AGGAGTTCTG GGACCCGAGC CGGGTAAAAA TCGACCAGTT GATCTTCGCC ATCGTGACCG ACGCCTCGGC GCGCATGCAA AAGCTCAAGG CCGACGAGTG CCAGGTGTCG GTCAACCCGC GTCCGGCAGA CCTCGCCAAG CTCAAGGAAG ACAAAAGCCT GCAGATTATC GAGAAGCCAG GTTTAAACCT CGGCTACATC GCCTACAACG TGCGCCACGA ACCGCTGGGC AAGCTGGAAG TGCGTCAGGC GCTGGACATG GCCGTCAACA AGAAAGCCAT CATCAACGCG GTTTACCAGG GCGCGGGGCA ACTGGCAGTC AACGCCATGC CACCGACCCA GTGGTCCTAT GACGCCAGCA TCAAGGACGC ACCTTACGAC CCGGAAAAAG CCAGGACCCT GTTGCGTGCC GCGGGCATCA AGGAAGGCAC CGAACTGACC CTGTGGGCCA TGCCGGTTCA GCGTCCTTAC AACCCCAACG CCAAGCTGAT GGCCGAAATG CTTCAGGCCG ACTGGGCCAA GGTGGGTATC AAGGTCAAAA TCGTCAGTTA CGAATGGGGC GAATACCTCA AACGCACCAA GAACGGCGAG CACGATATCT CGCTGATCGG CTGGACCGGG GACAACGGTG ACCCGGACAA CTGGCTGGGC ACGCTGTACA GCTGCGCGGC GATTGGCGGC AACAACTACT CGATGTGGTG CGACGAAAAA TACGACCAAC TGGTCAAGGC GGCCGTCGCG ACCACCGACC GAGAGAAGCG CACCGACCTG TACCAACAGG CGCAGCGCTA CCTCAAGGAG CAGGTGCCGA TTACCCCGGT GGCCCACTCC ACCGTCAATC AGCCGTTGCG CGCCGAGGTC AGGGACTTCC ACGTCAGCCC GTTTGGCCGC AACAACTTTT CGGGCGTGAG CATCGCCGAT TGA
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Protein sequence | MRKTLAVTSC LGLLALAPFT QAASNLVFCS EASPAGFDGA QYTSSTDNDA SEPIYNRLTE FKQGDTTVVP ALATSWDVSE NGLTYRFHLR EGVKFHSNKN FTPSRDFNAD DVVFTFNRML KPDHPFRVAY PTEFPYFTSM GLNKKIKSVE KTDPLTVVFT LNMVDAAFIQ NIAMNFAGIL SAEYAEQLMA KGDVRDINQQ PIGTGPFVFQ RYQKDSQIRY KGNKEFWDPS RVKIDQLIFA IVTDASARMQ KLKADECQVS VNPRPADLAK LKEDKSLQII EKPGLNLGYI AYNVRHEPLG KLEVRQALDM AVNKKAIINA VYQGAGQLAV NAMPPTQWSY DASIKDAPYD PEKARTLLRA AGIKEGTELT LWAMPVQRPY NPNAKLMAEM LQADWAKVGI KVKIVSYEWG EYLKRTKNGE HDISLIGWTG DNGDPDNWLG TLYSCAAIGG NNYSMWCDEK YDQLVKAAVA TTDREKRTDL YQQAQRYLKE QVPITPVAHS TVNQPLRAEV RDFHVSPFGR NNFSGVSIAD
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