| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4539 |
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| Symbol | |
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| ID | 1186222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5127060 |
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| End bp | 5127824 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395880 |
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| Product | transcriptional regulator, LuxR family, autoinducer-regulated |
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| Protein accession | NP_794292 |
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| Protein GI | 28871673 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.542388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATCA GGTTGTCGGA TTTCAATTCG CGTCTGCAAT CGGCATCTAC GCTGGATCAG
CAAATGGATT GCGCCCTGCT GCTGGCATCG GATATGGGGT TCGATGCTGT GATTTACGAT
TACAGCCCGG TGCCCGTGTC CCATGATGGA GCACTGATTA CCCCGTCGTT GCTGTCATTG
CGCAACACGC CCGCCGACTG GCATGCGCTT TGGTGCAGTC AGGGTTATTA CCAGATAGAT
CCGGTGCAAC ACCTGGCCGT CGCCAGCGTC TCGCCTTTCG TATGGTCCTA TCAGCCCAGA
GCCGAGACGG TGCTGCAAAC CTTCCTCACT GACATGCACA AGCCGGTGGT GCGTTATCTG
CACGATTCAC ACATGACGTG TGGCCTGACC GTGCCCATTC ACATGCCCAA GGGCGGTTTT
GCGACCCTGA CAGGCTTGTG TTCTGACAGC AGCGATGTGG CACTGGAAGA TGCCCGGCAG
AGCCTGGCGG AATTCGGCCT GCTGGCTCAT GCGTTTCAGG AAGTCGCCTA CCCGCTGTTT
GACCAGAAGA TGCGTTCCTG CAACGCCATC AAGCTGACCC GGCGTGAACG CGAGTGCCTG
AGCTGGTCGG CAGAAGGCCT GACGGCCAGA GAAATCGCCG ACCAACTCAA CCGCTCGGTC
GCGACCGTCA CACTGCATCT GAATTCGGCC ATGCAGAAAC TGGGCGCCAA AAACCGAGTT
CAGGCGGTGG TACGTGCCGT TCACTACCGT TTACTCGACC ACTGA
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| Protein sequence | MHIRLSDFNS RLQSASTLDQ QMDCALLLAS DMGFDAVIYD YSPVPVSHDG ALITPSLLSL
RNTPADWHAL WCSQGYYQID PVQHLAVASV SPFVWSYQPR AETVLQTFLT DMHKPVVRYL
HDSHMTCGLT VPIHMPKGGF ATLTGLCSDS SDVALEDARQ SLAEFGLLAH AFQEVAYPLF
DQKMRSCNAI KLTRRERECL SWSAEGLTAR EIADQLNRSV ATVTLHLNSA MQKLGAKNRV
QAVVRAVHYR LLDH
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